Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_1847 and Ga0059261_1848 are separated by 103 nucleotidesGa0059261_1848 and Ga0059261_1849 are separated by 138 nucleotidesGa0059261_1849 and Ga0059261_1850 are separated by 23 nucleotidesGa0059261_1850 and Ga0059261_1851 are separated by 73 nucleotides Ga0059261_1847: Ga0059261_1847 - hypothetical protein, at 1,956,507 to 1,956,632 _1847 Ga0059261_1848: Ga0059261_1848 - tRNA, at 1,956,736 to 1,956,810 _1848 Ga0059261_1849: Ga0059261_1849 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 1,956,949 to 1,958,364 _1849 Ga0059261_1850: Ga0059261_1850 - The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family, at 1,958,388 to 1,961,561 _1850 Ga0059261_1851: Ga0059261_1851 - RND family efflux transporter, MFP subunit, at 1,961,635 to 1,962,909 _1851
Group Condition Ga0059261_1847 Ga0059261_1848 Ga0059261_1849 Ga0059261_1850 Ga0059261_1851
motility inner cut, LB soft agar motility assay -1.1 N.D. +0.0 +0.1 -0.1
motility inner cut, LB soft agar motility assay -0.8 N.D. +0.1 -0.0 -0.2
stress Lomefloxacin 0.02 mM -0.1 N.D. -0.2 -0.2 -0.3
stress Thallium(I) acetate 0.01 mg/ml -0.7 N.D. -0.0 -0.0 +0.1
stress Lomefloxacin 0.01 mM -0.1 N.D. -0.3 -0.1 -0.1
stress 1-ethyl-3-methylimidazolium acetate 5 mM -0.5 N.D. +0.1 -0.0 -0.0
stress 1-ethyl-3-methylimidazolium chloride 10 mM -0.4 N.D. -0.1 +0.0 -0.0
carbon source NAG (C) -0.5 N.D. +0.0 +0.0 -0.0
nitrogen source L-Glutamic (N) -0.5 N.D. +0.0 +0.1 -0.1
stress Fusidic 0.0005 mg/ml -0.5 N.D. +0.1 +0.0 -0.0
carbon source D-Fructose (C) -0.4 N.D. -0.1 +0.0 +0.2
stress Cobalt chloride 0.08 mM -0.3 N.D. +0.2 +0.0 -0.1
stress Cholin acetate 10 mM -0.4 N.D. +0.1 +0.0 +0.0
nutrient D-Cellobiose (C); no added vitamins -0.6 N.D. +0.1 +0.0 +0.2
carbon source D-Glucose (C) -0.3 N.D. -0.1 -0.0 +0.2
stress acetate 10 mM -0.4 N.D. +0.2 -0.0 +0.1
stress 1-ethyl-3-methylimidazolium lysine 10 mM -0.4 N.D. +0.1 -0.0 +0.1
stress 1-ethyl-3-methylimidazolium chloride 20 mM -0.3 N.D. +0.1 -0.0 +0.1
motility outer cut, LB soft agar motility assay -0.3 N.D. -0.4 +0.2 +0.3
nutrient D-Glucose (C); no added vitamins -0.2 N.D. +0.0 -0.1 +0.2
nitrogen source L-Glutamine (N) -0.5 N.D. +0.0 +0.2 +0.2
nutrient D-Glucose (C); no added vitamins -0.4 N.D. +0.1 +0.1 +0.1
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins +0.3 N.D. -0.2 -0.1 -0.0
nitrogen source L-Proline (N) -0.4 N.D. +0.3 +0.0 +0.2
stress Nalidixic 0.05 mg/ml +0.4 N.D. -0.1 -0.1 -0.0
stress Rifampicin 0.001 mg/ml +0.4 N.D. +0.1 -0.0 -0.1
stress Tetracycline 0.002 mg/ml +0.6 N.D. -0.2 -0.0 +0.0
stress Gentamicin 0.005 mg/ml +0.4 N.D. -0.1 +0.1 +0.1
motility inner cut, LB soft agar motility assay -0.6 N.D. +0.5 +0.1 +0.8
motility outer cut, LB soft agar motility assay +0.9 N.D. +0.1 -0.0 +0.2
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