Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_1825 and Ga0059261_1826 are separated by 62 nucleotidesGa0059261_1826 and Ga0059261_1827 are separated by 181 nucleotidesGa0059261_1827 and Ga0059261_1828 overlap by 44 nucleotidesGa0059261_1828 and Ga0059261_1829 are separated by 5 nucleotides Ga0059261_1825: Ga0059261_1825 - hypothetical protein, at 1,936,208 to 1,936,609 _1825 Ga0059261_1826: Ga0059261_1826 - Domain of unknown function (DUF1905), at 1,936,672 to 1,937,004 _1826 Ga0059261_1827: Ga0059261_1827 - Predicted endonuclease containing a URI domain, at 1,937,186 to 1,937,500 _1827 Ga0059261_1828: Ga0059261_1828 - Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen, at 1,937,457 to 1,938,836 _1828 Ga0059261_1829: Ga0059261_1829 - Ribonucleotide reductase, beta subunit, at 1,938,842 to 1,939,894 _1829
Group Condition Ga0059261_1825 Ga0059261_1826 Ga0059261_1827 Ga0059261_1828 Ga0059261_1829
motility inner cut, LB soft agar motility assay -1.4 -0.7 +0.1 +0.2 N.D.
motility outer cut, LB soft agar motility assay -0.3 -0.5 -0.3 +0.2 N.D.
stress Choline chloride 40 mM -0.1 -0.5 -0.1 -0.2 N.D.
nitrogen source L-Glutamine (N) -0.2 -0.4 -0.2 +0.0 N.D.
nitrogen source L-Glutamic (N) -0.1 -0.5 -0.0 +0.2 N.D.
carbon source NAG (C) -0.2 -0.3 +0.0 +0.1 N.D.
pH LB, pH7 -0.5 +0.1 +0.1 -0.0 N.D.
stress Gentamicin 0.015 mg/ml -0.4 +0.2 -0.1 -0.0 N.D.
nutrient D-Cellobiose (C); no added vitamins -1.0 +0.2 +0.1 +0.3 N.D.
motility inner cut, LB soft agar motility assay +0.2 -0.6 +0.1 -0.1 N.D.
stress Vanillin 1 mM -0.5 +0.1 +0.1 -0.0 N.D.
lb LB -0.5 +0.0 -0.0 +0.2 N.D.
stress perchlorate 25 mM -0.1 +0.3 -0.3 -0.2 N.D.
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins -0.3 +0.2 +0.0 -0.1 N.D.
stress 5-Hydroxymethylfurfural 2.5 mM -0.4 +0.2 +0.1 +0.0 N.D.
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins +0.1 -0.5 +0.3 +0.0 N.D.
stress perchlorate 50 mM +0.0 +0.3 -0.2 -0.1 N.D.
pH LB, pH7 -0.2 +0.3 -0.0 -0.1 N.D.
pH LB, pH7 -0.4 +0.4 -0.1 +0.1 N.D.
stress A22 0.02 mg/ml +0.2 -0.3 -0.2 +0.2 N.D.
motility inner cut, LB soft agar motility assay -0.7 -0.0 +0.5 +0.2 N.D.
pH LB, pH8 -0.3 +0.3 +0.0 -0.1 N.D.
stress Chloramphenicol 0.0001 mg/ml -0.3 +0.4 -0.2 +0.1 N.D.
stress Fusidic 0.0005 mg/ml -0.4 +0.1 +0.1 +0.2 N.D.
stress L-Lysine 50 mM -0.2 +0.3 -0.2 +0.2 N.D.
motility outer cut, LB soft agar motility assay +0.0 -0.3 -0.4 +0.9 N.D.
carbon source L-Glutamine (C) +0.3 +0.4 +0.1 -0.2 N.D.
temperature LB 20C +0.2 -0.0 +0.3 +0.2 N.D.
stress Chloride 200 mM +0.4 +0.3 +0.1 -0.1 N.D.
motility inner cut, LB soft agar motility assay +0.4 -0.0 -0.0 +0.6 N.D.
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