Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_1777 and Ga0059261_1778 overlap by 4 nucleotidesGa0059261_1778 and Ga0059261_1779 are separated by 156 nucleotidesGa0059261_1779 and Ga0059261_1780 are separated by 70 nucleotidesGa0059261_1780 and Ga0059261_1781 are separated by 43 nucleotides Ga0059261_1777: Ga0059261_1777 - D-fructose transporter, sugar porter family (from data), at 1,884,888 to 1,886,264 _1777 Ga0059261_1778: Ga0059261_1778 - beta-fructosidase for D-raffinose catabolism (EC 3.2.1.26) (from data), at 1,886,261 to 1,887,769 _1778 Ga0059261_1779: Ga0059261_1779 - TonB-dependent receptor, at 1,887,926 to 1,890,706 _1779 Ga0059261_1780: Ga0059261_1780 - Glycosyl hydrolases family 32 N-terminal domain, at 1,890,777 to 1,892,243 _1780 Ga0059261_1781: Ga0059261_1781 - haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E, at 1,892,287 to 1,892,961 _1781
Group Condition Ga0059261_1777 Ga0059261_1778 Ga0059261_1779 Ga0059261_1780 Ga0059261_1781
carbon source D-Raffinose (C) -5.0 -5.0 -0.3 +0.1 +0.1
carbon source D-Raffinose (C) -5.0 -4.7 +0.1 +0.1 -0.0
carbon source D-Fructose (C) -4.7 +0.2 +0.1 +0.1 +0.1
motility inner cut, LB soft agar motility assay -0.1 -0.2 +0.0 +0.1 -0.2
lb LB -0.1 -0.0 -0.1 -0.1 -0.2
lb LB -0.1 -0.0 -0.0 -0.1 -0.2
nutrient D-Glucose (C); no added vitamins -0.2 -0.0 -0.1 -0.1 -0.0
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins -0.1 -0.0 -0.0 +0.0 -0.2
motility outer cut, LB soft agar motility assay +0.0 +0.1 +0.0 -0.0 -0.5
stress Rifampicin 0.001 mg/ml -0.2 +0.0 +0.1 -0.0 -0.3
pH LB, pH6 -0.0 +0.0 -0.0 +0.0 -0.3
nutrient D-Cellobiose (C); no added vitamins -0.0 -0.0 +0.1 -0.2 -0.1
carbon source D-Glucose (C) -0.1 -0.1 +0.0 -0.1 -0.1
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins -0.2 +0.0 -0.0 -0.1 -0.1
stress perchlorate 25 mM +0.0 -0.0 -0.0 +0.0 -0.3
motility inner cut, LB soft agar motility assay +0.1 +0.1 +0.0 -0.2 -0.1
nitrogen source L-Glutamine (N) -0.2 -0.0 -0.1 -0.1 +0.2
pH LB, pH6 -0.2 +0.1 -0.0 +0.1 -0.0
stress Carbenicillin 0.03 mg/ml +0.1 -0.1 +0.1 +0.1 -0.1
pH LB, pH7 -0.1 +0.1 -0.0 +0.1 -0.2
lb LB -0.1 +0.0 -0.0 -0.1 +0.1
pH LB, pH8 -0.0 +0.1 +0.0 +0.1 -0.1
stress L-Lysine 50 mM -0.1 +0.1 -0.0 -0.1 +0.2
carbon source D-Xylose (C) -0.1 +0.0 +0.0 -0.0 +0.2
motility inner cut, LB soft agar motility assay -0.0 -0.2 -0.1 +0.0 +0.3
carbon source NAG (C) +0.2 +0.0 +0.1 -0.0 -0.1
carbon source D-Glucose (C) -0.1 +0.0 +0.1 -0.0 +0.2
motility inner cut, LB soft agar motility assay +0.3 +0.1 -0.0 -0.1 +0.2
stress Tetracycline 0.002 mg/ml +0.0 +0.2 -0.0 +0.1 +0.2
motility outer cut, LB soft agar motility assay +0.2 +0.1 +0.1 -0.0 +0.2
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