Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_1735 and Ga0059261_1736 overlap by 4 nucleotidesGa0059261_1736 and Ga0059261_1737 are separated by 44 nucleotidesGa0059261_1737 and Ga0059261_1738 are separated by 9 nucleotidesGa0059261_1738 and Ga0059261_1739 are separated by 171 nucleotides Ga0059261_1735: Ga0059261_1735 - DNA replication protein, at 1,839,004 to 1,839,834 _1735 Ga0059261_1736: Ga0059261_1736 - Transposase and inactivated derivatives, at 1,839,831 to 1,841,330 _1736 Ga0059261_1737: Ga0059261_1737 - hypothetical protein, at 1,841,375 to 1,841,782 _1737 Ga0059261_1738: Ga0059261_1738 - Ti-type conjugative transfer relaxase TraA, at 1,841,792 to 1,844,608 _1738 Ga0059261_1739: Ga0059261_1739 - Conjugal transfer protein TraD, at 1,844,780 to 1,845,103 _1739
Group Condition Ga0059261_1735 Ga0059261_1736 Ga0059261_1737 Ga0059261_1738 Ga0059261_1739
motility inner cut, LB soft agar motility assay N.D. N.D. -0.1 -0.1 -2.0
nutrient D-Glucose (C); no added vitamins N.D. N.D. -0.4 -0.1 -0.8
nitrogen source L-Proline (N) N.D. N.D. +0.1 +0.0 -0.8
carbon source D-Fructose (C) N.D. N.D. -0.0 -0.1 -0.6
carbon source D-Maltose (C) N.D. N.D. -0.2 -0.0 -0.4
carbon source NAG (C) N.D. N.D. -0.1 -0.1 -0.4
stress Cobalt chloride 0.04 mM N.D. N.D. -0.2 +0.0 -0.5
stress sodium fluoride 10 mM N.D. N.D. +0.0 -0.0 -0.7
motility outer cut, LB soft agar motility assay N.D. N.D. -0.1 -0.1 -0.4
carbon source L-Glutamic (C) N.D. N.D. -0.0 +0.0 -0.5
motility inner cut, LB soft agar motility assay N.D. N.D. -0.6 +0.2 -0.0
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins N.D. N.D. -0.5 +0.0 +0.1
stress copper (II) chloride 0.75 mM N.D. N.D. +0.2 -0.0 -0.4
motility inner cut, LB soft agar motility assay N.D. N.D. +0.4 +0.0 -0.6
temperature LB 30C N.D. N.D. +0.3 -0.0 -0.4
stress Polymyxin B sulfate 0.1 mg/ml N.D. N.D. +0.4 -0.0 -0.5
stress A22 0.02 mg/ml N.D. N.D. +0.2 +0.0 -0.2
stress Cholin acetate 40 mM N.D. N.D. +0.4 -0.1 -0.2
nutrient D-Glucose (C); no added vitamins N.D. N.D. -0.4 -0.1 +0.6
carbon source L-Glutamic (C) N.D. N.D. -0.3 -0.0 +0.4
stress L-Lysine 50 mM N.D. N.D. +0.4 +0.0 -0.2
stress acetate 10 mM N.D. N.D. +0.0 +0.0 +0.4
temperature LB 30C N.D. N.D. +0.2 +0.0 +0.3
stress Cholin acetate 10 mM N.D. N.D. +0.3 +0.0 +0.2
stress Spectinomycin 2 mg/ml N.D. N.D. +0.2 +0.0 +0.4
stress benzoic 0.145 mg/ml N.D. N.D. +0.1 -0.0 +0.5
stress 1-ethyl-3-methylimidazolium chloride 10 mM N.D. N.D. +0.3 +0.0 +0.3
stress 1-ethyl-3-methylimidazolium acetate 5 mM N.D. N.D. +0.4 +0.0 +0.4
motility inner cut, LB soft agar motility assay N.D. N.D. +0.4 +0.4 +0.3
motility outer cut, LB soft agar motility assay N.D. N.D. +1.1 -0.3 +0.4
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