Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_1642 and Ga0059261_1643 are separated by 176 nucleotidesGa0059261_1643 and Ga0059261_1644 are separated by 98 nucleotidesGa0059261_1644 and Ga0059261_1645 overlap by 4 nucleotidesGa0059261_1645 and Ga0059261_1646 are separated by 26 nucleotides Ga0059261_1642: Ga0059261_1642 - TonB-dependent receptor, at 1,726,109 to 1,729,402 _1642 Ga0059261_1643: Ga0059261_1643 - Uncharacterized conserved protein, at 1,729,579 to 1,730,661 _1643 Ga0059261_1644: Ga0059261_1644 - Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) (from data), at 1,730,760 to 1,731,803 _1644 Ga0059261_1645: Ga0059261_1645 - N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data), at 1,731,800 to 1,732,960 _1645 Ga0059261_1646: Ga0059261_1646 - Phosphocarrier protein HPr/phosphoenolpyruvate--protein phosphotransferase (EC 2.7.3.9)/PTS system IIA component, Glc family (TC 4.A.1), at 1,732,987 to 1,735,479 _1646
Group Condition Ga0059261_1642 Ga0059261_1643 Ga0059261_1644 Ga0059261_1645 Ga0059261_1646
carbon source NAG (C) +0.1 +0.5 -5.4 -5.2 -5.4
carbon source NAG (C) +0.1 +0.4 -5.8 -5.4 -4.5
carbon source NAG (C) +0.0 +0.2 -5.6 -4.6 -4.7
carbon source NAG (C) +0.0 +0.3 -5.1 -4.3 -4.6
motility inner cut, LB soft agar motility assay -0.2 +0.3 -0.0 -0.6 -0.3
motility inner cut, LB soft agar motility assay -0.1 -0.2 -0.1 -0.0 +0.1
pH LB, pH6 +0.0 -0.0 +0.1 -0.1 -0.2
motility outer cut, LB soft agar motility assay +0.1 +0.1 +0.3 -0.7 -0.0
stress D-Cycloserine 0.064 mg/ml +0.0 +0.1 +0.1 -0.4 +0.0
motility inner cut, LB soft agar motility assay -0.1 -0.1 +0.2 -0.1 -0.1
stress methylglyoxal 0.005 vol% -0.0 +0.2 -0.0 -0.0 -0.2
temperature LB 37C -0.0 +0.1 -0.1 -0.3 +0.2
nutrient D-Cellobiose (C); no added vitamins +0.0 -0.0 -0.2 +0.2 +0.0
stress Thallium(I) acetate 0.01 mg/ml -0.1 +0.2 -0.1 -0.1 -0.0
stress Rifampicin 0.001 mg/ml -0.0 +0.1 +0.0 -0.2 +0.1
pH LB, pH8 +0.0 -0.2 +0.1 +0.1 +0.0
nutrient D-Cellobiose (C); no added vitamins -0.1 -0.2 -0.1 +0.3 +0.1
temperature LB 20C +0.1 +0.1 +0.1 -0.2 +0.0
temperature LB 20C -0.0 +0.1 -0.1 -0.0 +0.1
stress Polymyxin B sulfate 0.1 mg/ml -0.0 -0.1 +0.1 +0.0 +0.1
motility outer cut, LB soft agar motility assay +0.1 +0.4 -0.2 -0.2 -0.1
nutrient D-Glucose (C); no added vitamins -0.0 -0.2 +0.2 +0.4 -0.2
stress Gentamicin 0.005 mg/ml -0.1 +0.2 +0.1 +0.1 -0.1
carbon source D-Glucose (C) +0.1 -0.1 +0.0 +0.2 +0.0
motility inner cut, LB soft agar motility assay +0.1 +0.3 -0.2 -0.0 +0.2
carbon source L-Glutamine (C) +0.1 +0.1 -0.2 +0.0 +0.3
nutrient D-Glucose (C); no added vitamins +0.0 +0.1 +0.1 +0.2 -0.1
carbon source D-Glucose (C) +0.1 +0.1 +0.2 +0.1 +0.1
nutrient L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins +0.0 +0.1 +0.1 +0.3 -0.0
nitrogen source L-Proline (N) +0.0 +0.1 -0.1 +0.4 +0.1
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