Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_1627 and Ga0059261_1628 are separated by 14 nucleotidesGa0059261_1628 and Ga0059261_1629 are separated by 83 nucleotidesGa0059261_1629 and Ga0059261_1630 overlap by 1 nucleotidesGa0059261_1630 and Ga0059261_1631 are separated by 167 nucleotides Ga0059261_1627: Ga0059261_1627 - Alginate lyase, at 1,704,300 to 1,705,550 _1627 Ga0059261_1628: Ga0059261_1628 - TonB-dependent receptor, at 1,705,565 to 1,708,495 _1628 Ga0059261_1629: Ga0059261_1629 - hypothetical protein, at 1,708,579 to 1,710,441 _1629 Ga0059261_1630: Ga0059261_1630 - Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins, at 1,710,441 to 1,711,583 _1630 Ga0059261_1631: Ga0059261_1631 - L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily, at 1,711,751 to 1,712,962 _1631
Group Condition Ga0059261_1627 Ga0059261_1628 Ga0059261_1629 Ga0059261_1630 Ga0059261_1631
motility outer cut, LB soft agar motility assay -0.0 -0.1 -0.2 -0.3 -0.1
temperature LB 20C -0.1 -0.1 +0.0 -0.2 +0.0
motility inner cut, LB soft agar motility assay -0.1 -0.0 +0.2 -0.3 -0.0
carbon source NAG (C) -0.1 +0.0 -0.0 -0.1 +0.1
carbon source NAG (C) -0.1 -0.0 +0.0 -0.1 +0.1
stress Chloride 100 mM +0.1 -0.0 +0.1 -0.2 +0.0
stress Sisomicin 0.12 mg/ml +0.1 +0.0 +0.0 -0.1 +0.0
motility inner cut, LB soft agar motility assay -0.1 -0.1 +0.1 +0.1 -0.0
stress perchlorate 50 mM +0.1 +0.0 +0.1 -0.1 +0.1
motility inner cut, LB soft agar motility assay -0.1 +0.0 -0.1 +0.3 -0.0
carbon source D-Maltose (C) +0.1 -0.0 +0.1 -0.1 +0.1
pH LB, pH6 +0.1 +0.1 -0.0 -0.1 +0.1
stress Lomefloxacin 0.02 mM -0.1 +0.0 +0.1 +0.1 +0.1
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins +0.1 -0.0 +0.1 +0.1 -0.1
carbon source D-Glucose (C) +0.1 +0.1 +0.1 -0.0 -0.0
carbon source L-Glutamic (C) +0.1 +0.1 +0.1 -0.0 +0.1
nutrient D-Glucose (C); no added vitamins +0.1 +0.1 +0.0 -0.1 +0.1
carbon source L-Glutamine (C) +0.1 +0.1 +0.1 -0.0 +0.1
stress Cholin acetate 40 mM +0.0 +0.2 +0.1 +0.1 -0.0
stress acetate 10 mM +0.1 +0.1 +0.1 +0.0 +0.0
nutrient L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins +0.1 +0.0 +0.1 +0.0 +0.1
stress acetate 40 mM +0.1 +0.1 +0.0 +0.0 +0.1
stress 1-ethyl-3-methylimidazolium acetate 20 mM +0.1 +0.1 +0.1 +0.1 -0.0
stress 1-ethyl-3-methylimidazolium lysine 5 mM +0.1 +0.1 +0.0 +0.1 +0.0
nutrient L-Glutamic (C); no added vitamins +0.1 +0.1 +0.1 -0.0 +0.0
stress Cholin acetate 20 mM +0.0 +0.1 +0.1 +0.1 +0.0
nutrient D-Cellobiose (C); no added vitamins +0.1 +0.1 +0.1 +0.0 +0.0
stress acetate 20 mM +0.0 +0.1 +0.0 +0.2 +0.0
nutrient D-Glucose (C); no added vitamins +0.1 +0.1 +0.1 -0.0 +0.0
carbon source D-Glucose (C) +0.2 +0.1 +0.0 +0.1 +0.0
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Ga0059261_1627
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Ga0059261_1631
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