Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_1584 and Ga0059261_1585 are separated by 175 nucleotidesGa0059261_1585 and Ga0059261_1586 are separated by 152 nucleotidesGa0059261_1586 and Ga0059261_1587 are separated by 88 nucleotidesGa0059261_1587 and Ga0059261_1588 are separated by 33 nucleotides Ga0059261_1584: Ga0059261_1584 - transcriptional regulator, LacI family, at 1,659,878 to 1,660,906 _1584 Ga0059261_1585: Ga0059261_1585 - Major Facilitator Superfamily, at 1,661,082 to 1,662,566 _1585 Ga0059261_1586: Ga0059261_1586 - Threonine synthase, at 1,662,719 to 1,664,146 _1586 Ga0059261_1587: Ga0059261_1587 - hypothetical protein, at 1,664,235 to 1,664,777 _1587 Ga0059261_1588: Ga0059261_1588 - Methyltransferase domain, at 1,664,811 to 1,665,572 _1588
Group Condition Ga0059261_1584 Ga0059261_1585 Ga0059261_1586 Ga0059261_1587 Ga0059261_1588
carbon source a-Cyclodextrin (C) -5.3 -5.4 -0.1 +0.1 -0.1
carbon source a-Cyclodextrin (C) -4.6 -4.9 -0.1 -0.1 -0.1
carbon source D-Maltose (C) -1.8 -2.1 -0.1 +0.0 -0.1
carbon source D-Maltose (C) -1.6 -2.1 -0.0 +0.4 +0.0
motility outer cut, LB soft agar motility assay -0.3 +0.0 -0.2 -0.7 +0.0
motility inner cut, LB soft agar motility assay +0.1 -0.1 +0.2 -0.2 -0.6
motility inner cut, LB soft agar motility assay +0.6 +0.4 -0.5 -0.4 -0.0
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins +0.2 +0.2 +0.2 +0.3 -0.2
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins +0.3 +0.1 +0.2 +0.2 +0.2
stress 1-ethyl-3-methylimidazolium lysine 5 mM +0.1 +0.2 +0.2 +0.3 +0.3
stress 1-ethyl-3-methylimidazolium acetate 5 mM -0.1 +0.1 +0.2 +0.4 +0.4
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins -0.0 +0.2 +0.2 +0.4 +0.3
stress acetate 40 mM +0.2 +0.2 +0.2 +0.4 +0.1
nutrient L-Glutamic (C); no added vitamins +0.2 +0.2 +0.2 +0.3 +0.2
stress acetate 20 mM +0.3 +0.1 +0.2 +0.2 +0.2
nutrient L-Glutamic (C); no added vitamins +0.2 +0.2 +0.1 +0.3 +0.2
stress 1-ethyl-3-methylimidazolium acetate 10 mM +0.1 +0.1 +0.2 +0.5 +0.2
stress Cholin acetate 20 mM -0.0 +0.0 +0.3 +0.4 +0.4
stress 1-ethyl-3-methylimidazolium acetate 20 mM +0.2 +0.1 +0.2 +0.4 +0.2
motility inner cut, LB soft agar motility assay +0.4 +0.2 +0.0 +0.4 +0.1
carbon source L-Glutamic (C) +0.1 +0.1 +0.2 +0.4 +0.2
stress Choline chloride 10 mM +0.1 +0.2 +0.1 +0.3 +0.4
stress Choline Lysine 5 mM +0.0 +0.2 +0.3 +0.4 +0.3
stress 1-ethyl-3-methylimidazolium chloride 5 mM +0.2 +0.2 +0.2 +0.4 +0.2
carbon source D-Glucose (C) +0.3 +0.2 +0.2 +0.4 +0.0
nutrient D-Cellobiose (C); no added vitamins +0.4 +0.1 +0.3 +0.6 -0.2
stress Cholin acetate 40 mM +0.3 +0.1 +0.2 +0.3 +0.3
nutrient L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins +0.2 +0.3 +0.2 +0.3 +0.2
stress 1-ethyl-3-methylimidazolium lysine 2.5 mM +0.2 +0.2 +0.3 +0.5 +0.2
stress Choline chloride 20 mM +0.1 +0.2 +0.2 +0.5 +0.4
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