Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_1579 and Ga0059261_1580 are separated by 28 nucleotidesGa0059261_1580 and Ga0059261_1581 overlap by 4 nucleotidesGa0059261_1581 and Ga0059261_1582 overlap by 4 nucleotidesGa0059261_1582 and Ga0059261_1583 are separated by 63 nucleotides Ga0059261_1579: Ga0059261_1579 - Glycosyl-hydrolase 97 N-terminal/Glycosyl-hydrolase 97 C-terminal, oligomerisation/Glycoside hydrolase 97, at 1,649,688 to 1,651,745 _1579 Ga0059261_1580: Ga0059261_1580 - Glycosidases, at 1,651,774 to 1,653,399 _1580 Ga0059261_1581: Ga0059261_1581 - Maltose or maltodextrin glucosidase (EC 3.2.1.20) (from data), at 1,653,396 to 1,655,210 _1581 Ga0059261_1582: Ga0059261_1582 - Tryptophan halogenase, at 1,655,207 to 1,656,739 _1582 Ga0059261_1583: Ga0059261_1583 - TonB-dependent receptor, at 1,656,803 to 1,659,643 _1583
Group Condition Ga0059261_1579 Ga0059261_1580 Ga0059261_1581 Ga0059261_1582 Ga0059261_1583
carbon source a-Cyclodextrin (C) -0.8 -1.3 -5.2 -4.1 -5.0
carbon source a-Cyclodextrin (C) -0.8 -1.2 -5.4 -3.7 -5.0
carbon source D-Maltose (C) -0.5 -0.3 -3.2 -2.6 -1.5
carbon source D-Maltose (C) -0.6 -0.2 -3.1 -2.5 -1.5
nitrogen source L-Histidine (N) +0.0 -1.1 -0.1 +0.0 -0.0
carbon source D-Glucose (C) +0.0 -0.8 -0.1 -0.1 -0.0
carbon source D-Glucose (C) +0.1 -0.8 -0.2 -0.1 +0.0
carbon source D-Glucose (C) +0.0 -0.6 -0.2 -0.0 +0.0
nitrogen source L-Glutamine (N) +0.0 -0.7 -0.1 +0.0 +0.0
nutrient L-Glutamic (C); no added vitamins +0.2 -0.7 +0.2 +0.2 +0.1
nutrient L-Glutamic (C); no added vitamins +0.2 -0.6 +0.2 +0.2 +0.1
carbon source L-Glutamic (C) +0.2 -0.4 +0.2 +0.1 +0.2
carbon source L-Glutamic (C) +0.1 -0.2 +0.1 +0.2 +0.2
nutrient L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins +0.2 -0.4 +0.2 +0.2 +0.2
nutrient L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins +0.2 -0.3 +0.1 +0.2 +0.2
nutrient D-Glucose (C); no added vitamins +0.3 -0.2 +0.2 -0.0 +0.2
nutrient D-Glucose (C); no added vitamins +0.2 -0.2 +0.2 +0.2 +0.1
stress Choline chloride 20 mM +0.1 +0.2 +0.1 +0.2 +0.1
stress 1-ethyl-3-methylimidazolium lysine 2.5 mM +0.1 +0.2 +0.1 +0.1 +0.2
stress acetate 40 mM +0.1 +0.1 +0.2 +0.2 +0.2
stress Cholin acetate 10 mM +0.1 +0.3 +0.1 +0.2 +0.2
carbon source D-Cellobiose (C) +0.2 +0.1 +0.2 +0.3 +0.1
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins +0.1 +0.1 +0.2 +0.3 +0.1
stress 1-ethyl-3-methylimidazolium chloride 10 mM +0.2 +0.2 +0.2 +0.2 +0.2
stress 1-ethyl-3-methylimidazolium acetate 10 mM +0.2 +0.3 +0.1 +0.2 +0.2
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins +0.2 +0.1 +0.3 +0.2 +0.2
stress 1-ethyl-3-methylimidazolium lysine 5 mM +0.1 +0.2 +0.1 +0.3 +0.2
motility outer cut, LB soft agar motility assay +0.3 +0.6 -0.4 +0.3 +0.0
carbon source D-Glucose (C) +0.2 +0.2 +0.2 +0.2 +0.3
motility inner cut, LB soft agar motility assay +0.4 +0.8 -0.2 +0.3 +0.0
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