Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_1503 and Ga0059261_1504 are separated by 95 nucleotidesGa0059261_1504 and Ga0059261_1505 are separated by 20 nucleotidesGa0059261_1505 and Ga0059261_1506 overlap by 4 nucleotidesGa0059261_1506 and Ga0059261_1507 are separated by 38 nucleotides Ga0059261_1503: Ga0059261_1503 - replicative DNA helicase, at 1,586,887 to 1,588,401 _1503 Ga0059261_1504: Ga0059261_1504 - Uncharacterized protein conserved in bacteria, at 1,588,497 to 1,588,979 _1504 Ga0059261_1505: Ga0059261_1505 - Lyzozyme M1 (1,4-beta-N-acetylmuramidase), at 1,589,000 to 1,589,677 _1505 Ga0059261_1506: Ga0059261_1506 - cytidine deaminase (EC 3.5.4.5), at 1,589,674 to 1,590,138 _1506 Ga0059261_1507: Ga0059261_1507 - deoxycytidine triphosphate deaminase, at 1,590,177 to 1,590,731 _1507
Group Condition Ga0059261_1503 Ga0059261_1504 Ga0059261_1505 Ga0059261_1506 Ga0059261_1507
carbon source L-Glutamine (C) N.D. -1.6 +0.3 -0.1 -4.1
carbon source D-Cellobiose (C) N.D. +0.2 +0.2 +0.2 -5.4
carbon source D-Cellobiose (C) N.D. +0.3 +0.4 +0.0 -5.1
carbon source L-Glutamine (C) N.D. -0.7 +0.3 +0.0 -3.9
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins N.D. +0.1 +0.5 +0.4 -5.2
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins N.D. -0.1 +0.5 +0.4 -4.8
carbon source D-Cellobiose (C) N.D. -0.2 +0.2 +0.0 -3.9
carbon source D-Raffinose (C) N.D. +0.1 +0.2 +0.0 -4.1
nitrogen source L-Histidine (N) N.D. +0.3 +0.2 +0.1 -4.4
carbon source D-Cellobiose (C) N.D. -0.2 +0.3 -0.0 -3.7
carbon source a-Cyclodextrin (C) N.D. +0.2 +0.3 +0.0 -4.0
carbon source D-Fructose (C) N.D. +0.0 +0.6 +0.1 -4.2
nitrogen source L-Glutamine (N) N.D. +0.4 +0.3 +0.3 -4.2
carbon source NAG (C) N.D. +0.4 +0.6 -0.0 -4.2
carbon source D-Glucose (C) N.D. -0.0 +0.3 +0.1 -3.5
nutrient D-Cellobiose (C); no added vitamins N.D. +0.1 +0.8 +0.5 -4.5
carbon source D-Maltose (C) N.D. +0.4 +0.7 +0.1 -4.0
carbon source NAG (C) N.D. +0.4 +0.5 +0.0 -3.7
carbon source a-Cyclodextrin (C) N.D. +0.2 +0.4 +0.0 -3.5
nitrogen source L-Alanine (N) N.D. +0.6 +0.5 +0.4 -4.2
nitrogen source L-Proline (N) N.D. +0.1 +0.6 +0.3 -3.6
nitrogen source L-Glutamic (N) N.D. +0.4 +0.3 +0.1 -3.4
carbon source D-Maltose (C) N.D. +0.5 +0.6 -0.1 -3.5
nutrient L-Glutamic (C); no added vitamins N.D. +1.1 +0.4 +0.1 -3.7
nutrient L-Glutamic (C); no added vitamins N.D. +1.2 +0.5 +0.1 -3.9
nutrient D-Glucose (C); no added vitamins N.D. +0.7 +0.9 +0.6 -3.9
nutrient L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins N.D. +0.7 +0.3 +0.2 -2.8
nutrient D-Glucose (C); no added vitamins N.D. +0.2 +1.1 +0.4 -3.1
nutrient D-Cellobiose (C); no added vitamins N.D. +0.4 +1.2 +0.5 -2.9
nitrogen source L-Glutamine (N) N.D. +1.9 +0.8 +0.4 -3.5
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