Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_1483 and Ga0059261_1484 are separated by 76 nucleotidesGa0059261_1484 and Ga0059261_1485 overlap by 8 nucleotidesGa0059261_1485 and Ga0059261_1486 are separated by 0 nucleotidesGa0059261_1486 and Ga0059261_1487 overlap by 4 nucleotides Ga0059261_1483: Ga0059261_1483 - acetyl-CoA acetyltransferases, at 1,566,785 to 1,567,972 _1483 Ga0059261_1484: Ga0059261_1484 - hypothetical protein, at 1,568,049 to 1,568,300 _1484 Ga0059261_1485: Ga0059261_1485 - Type II secretory pathway, prepilin signal peptidase PulO and related peptidases, at 1,568,293 to 1,569,039 _1485 Ga0059261_1486: Ga0059261_1486 - NAD-dependent aldehyde dehydrogenases, at 1,569,040 to 1,570,446 _1486 Ga0059261_1487: Ga0059261_1487 - GMP synthase - Glutamine amidotransferase domain, at 1,570,443 to 1,571,138 _1487
Group Condition Ga0059261_1483 Ga0059261_1484 Ga0059261_1485 Ga0059261_1486 Ga0059261_1487
stress Sisomicin 0.12 mg/ml -4.8 -0.1 +0.5 +0.1 +0.2
motility inner cut, LB soft agar motility assay -0.3 -2.5 -0.4 -0.1 -0.6
motility inner cut, LB soft agar motility assay -0.2 -1.7 -0.9 -0.2 -0.3
motility inner cut, LB soft agar motility assay -0.1 -1.0 -0.6 +0.1 +0.0
stress Gentamicin 0.005 mg/ml -1.3 -0.3 +0.1 -0.0 -0.2
stress Gentamicin 0.015 mg/ml -2.0 +0.1 +0.3 +0.0 +0.1
motility outer cut, LB soft agar motility assay +0.0 -0.4 -0.6 +0.0 -0.0
carbon source a-Cyclodextrin (C) -0.2 -0.4 -0.3 +0.1 +0.0
temperature LB 20C -0.3 -0.6 +0.1 +0.2 +0.2
carbon source NAG (C) -0.6 +0.1 -0.2 -0.2 +0.6
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins +0.1 +0.4 -0.7 -0.1 +0.0
carbon source D-Maltose (C) -0.1 -0.5 +0.0 +0.1 +0.3
nutrient D-Glucose (C); no added vitamins -0.1 +0.3 -0.8 -0.2 +0.9
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins -0.0 +0.8 -0.7 +0.1 -0.1
carbon source NAG (C) -0.5 +0.4 -0.3 +0.3 +0.3
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins -0.0 +0.3 -0.5 +0.1 +0.2
nutrient D-Cellobiose (C); no added vitamins +0.1 +0.1 -0.9 +0.0 +0.9
pH LB, pH8 -0.0 +0.6 +0.1 -0.2 -0.2
carbon source L-Glutamic (C) +0.1 +0.4 -0.3 +0.1 +0.2
nutrient D-Glucose (C); no added vitamins -0.0 -0.2 -0.4 +0.2 +0.8
nutrient D-Cellobiose (C); no added vitamins +0.1 +0.2 -0.8 +0.1 +1.0
nitrogen source L-Alanine (N) +0.1 -0.3 -0.2 +0.3 +0.6
carbon source D-Xylose (C) +0.3 -0.3 +0.1 +0.0 +0.7
nitrogen source L-Glutamine (N) -0.0 -0.2 +0.1 +0.0 +1.1
carbon source D-Glucose (C) +0.2 +0.5 +0.1 +0.2 +0.1
carbon source D-Xylose (C) +0.5 -0.1 -0.0 -0.0 +1.0
nitrogen source L-Histidine (N) -0.2 -0.0 +0.0 +0.1 +1.6
nitrogen source L-Proline (N) +0.3 -0.0 +0.2 +0.0 +2.5
nitrogen source L-Glutamine (N) -0.3 -0.5 +0.2 +0.0 +3.8
nitrogen source L-Proline (N) +0.1 -0.1 +0.3 +0.0 +3.7
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