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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingomonas koreensis DSMZ 15582
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ga0059261_1389 and Ga0059261_1390 are separated by 5 nucleotides
Ga0059261_1390 and Ga0059261_1391 overlap by 4 nucleotides
Ga0059261_1391 and Ga0059261_1392 are separated by 115 nucleotides
Ga0059261_1392 and Ga0059261_1393 are separated by 30 nucleotides
Ga0059261_1389: Ga0059261_1389 - Mechanosensitive ion channel, at 1,466,386 to 1,467,711
_1389
Ga0059261_1390: Ga0059261_1390 - Uncharacterized protein conserved in bacteria, at 1,467,717 to 1,468,853
_1390
Ga0059261_1391: Ga0059261_1391 - hypothetical protein, at 1,468,850 to 1,470,550
_1391
Ga0059261_1392: Ga0059261_1392 - hypothetical protein, at 1,470,666 to 1,472,363
_1392
Ga0059261_1393: Ga0059261_1393 - argininosuccinate synthase (EC 6.3.4.5), at 1,472,394 to 1,473,611
_1393
Group
Condition
Ga0059261
_1389
Ga0059261
_1390
Ga0059261
_1391
Ga0059261
_1392
Ga0059261
_1393
nutrient
L-Glutamic (C); no added vitamins
-0.0
-0.0
N.D.
-0.1
-6.9
nutrient
L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins
+0.1
+0.0
N.D.
+0.0
-6.9
carbon source
L-Glutamic (C)
+0.1
+0.1
N.D.
+0.3
-7.1
nutrient
L-Glutamic (C); no added vitamins
+0.2
-0.0
N.D.
-0.1
-6.6
carbon source
L-Glutamic (C)
-0.0
+0.1
N.D.
+0.2
-6.7
nutrient
L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins
-0.0
+0.1
N.D.
+0.1
-6.2
carbon source
D-Cellobiose (C)
+0.1
+0.1
N.D.
+0.3
-6.4
carbon source
L-Glutamic (C)
+0.1
-0.1
N.D.
-0.1
-5.7
carbon source
D-Raffinose (C)
+0.1
+0.0
N.D.
-0.0
-5.9
carbon source
D-Raffinose (C)
+0.1
-0.0
N.D.
-0.1
-5.6
carbon source
L-Glutamic (C)
+0.2
-0.0
N.D.
-0.1
-5.7
carbon source
D-Cellobiose (C)
+0.2
-0.1
N.D.
+0.3
-6.1
carbon source
NAG (C)
+0.2
-0.1
N.D.
+0.1
-5.8
carbon source
a-Cyclodextrin (C)
+0.2
-0.1
N.D.
-0.1
-5.5
carbon source
D-Maltose (C)
+0.1
-0.0
N.D.
+0.2
-5.7
carbon source
NAG (C)
+0.2
-0.1
N.D.
+0.0
-5.7
nitrogen source
L-Glutamic (N)
+0.1
+0.0
N.D.
+0.2
-5.7
carbon source
D-Fructose (C)
+0.2
+0.0
N.D.
+0.1
-5.8
nutrient
D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins
+0.3
-0.0
N.D.
+0.2
-5.8
carbon source
a-Cyclodextrin (C)
+0.2
+0.1
N.D.
+0.0
-5.6
nitrogen source
L-Glutamic (N)
+0.1
-0.1
N.D.
+0.2
-5.5
nitrogen source
L-Glutamine (N)
+0.2
-0.1
N.D.
+0.2
-5.4
carbon source
D-Glucose (C)
+0.1
-0.0
N.D.
+0.3
-5.5
carbon source
D-Glucose (C)
+0.1
-0.0
N.D.
+0.2
-5.3
nitrogen source
L-Alanine (N)
+0.3
-0.1
N.D.
+0.2
-5.4
carbon source
D-Maltose (C)
+0.3
-0.0
N.D.
+0.1
-5.4
nitrogen source
L-Histidine (N)
+0.0
-0.2
N.D.
+0.4
-5.1
carbon source
NAG (C)
+0.2
-0.0
N.D.
+0.2
-5.2
carbon source
NAG (C)
+0.1
-0.1
N.D.
+0.3
-5.2
nitrogen source
L-Glutamine (N)
+0.2
-0.2
N.D.
+0.4
-4.9
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