Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_1231 and Ga0059261_1232 are separated by 20 nucleotidesGa0059261_1232 and Ga0059261_1233 are separated by 420 nucleotidesGa0059261_1233 and Ga0059261_1234 overlap by 4 nucleotidesGa0059261_1234 and Ga0059261_1235 are separated by 246 nucleotides Ga0059261_1231: Ga0059261_1231 - Sensors of blue-light using FAD, at 1,290,110 to 1,290,571 _1231 Ga0059261_1232: Ga0059261_1232 - Catalase, at 1,290,592 to 1,292,856 _1232 Ga0059261_1233: Ga0059261_1233 - Transposase and inactivated derivatives, at 1,293,277 to 1,294,185 _1233 Ga0059261_1234: Ga0059261_1234 - Transposase, at 1,294,182 to 1,294,448 _1234 Ga0059261_1235: Ga0059261_1235 - Signal transduction histidine kinase, at 1,294,695 to 1,298,144 _1235
Group Condition Ga0059261_1231 Ga0059261_1232 Ga0059261_1233 Ga0059261_1234 Ga0059261_1235
motility inner cut, LB soft agar motility assay -0.2 -0.1 +0.2 -1.1 +0.1
nitrogen source L-Proline (N) -0.2 -0.1 -0.2 -0.5 +0.0
carbon source D-Cellobiose (C) -0.1 -0.3 -0.1 -0.4 +0.1
carbon source D-Glucose (C) -0.0 -0.2 -0.1 -0.4 +0.0
carbon source L-Glutamic (C) -0.2 -0.1 -0.0 -0.4 -0.0
carbon source L-Glutamic (C) -0.1 -0.3 -0.0 -0.2 -0.0
stress syringaldehyde 0.5 mM +0.0 -0.1 -0.1 -0.5 +0.0
carbon source D-Raffinose (C) -0.1 -0.0 +0.2 -0.6 -0.0
nitrogen source L-Glutamine (N) -0.2 -0.0 -0.1 -0.4 +0.1
carbon source D-Xylose (C) -0.2 -0.0 +0.1 -0.4 +0.0
carbon source NAG (C) -0.1 -0.1 -0.1 -0.5 +0.2
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins +0.0 +0.1 -0.1 -0.4 -0.0
motility inner cut, LB soft agar motility assay +0.4 +0.3 -0.0 -1.3 +0.2
carbon source D-Maltose (C) -0.1 +0.0 -0.1 -0.3 +0.1
carbon source casaminos (C) -0.1 +0.1 +0.1 -0.4 -0.1
pH LB, pH8 +0.1 -0.1 -0.0 -0.5 +0.1
nitrogen source L-Histidine (N) -0.2 -0.0 +0.1 -0.3 +0.1
stress nitrite 5 mM -0.1 +0.0 +0.1 -0.4 -0.0
stress Gentamicin 0.005 mg/ml +0.2 -0.0 -0.1 -0.2 +0.1
stress Gentamicin 0.015 mg/ml +0.1 -0.0 +0.0 -0.3 +0.1
motility inner cut, LB soft agar motility assay +0.2 +0.1 +0.3 -0.3 -0.1
stress 1-ethyl-3-methylimidazolium acetate 10 mM -0.1 -0.1 +0.1 +0.3 +0.1
carbon source D-Glucose (C) -0.0 +0.1 -0.1 +0.4 -0.0
carbon source NAG (C) -0.1 -0.1 -0.2 +0.7 +0.0
stress 1-ethyl-3-methylimidazolium lysine 10 mM -0.1 -0.0 -0.0 +0.5 +0.0
stress Choline Lysine 5 mM -0.1 -0.1 -0.0 +0.6 +0.0
nutrient D-Glucose (C); no added vitamins -0.1 +0.1 -0.3 +0.6 +0.2
stress Fusidic 0.0005 mg/ml +0.1 +0.1 +0.1 +0.2 +0.0
motility outer cut, LB soft agar motility assay -0.2 -0.2 +0.2 +0.6 +0.4
motility outer cut, LB soft agar motility assay +0.1 +0.1 +0.2 +0.6 -0.0
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Ga0059261_1231
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Ga0059261_1232
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