Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_1159 and Ga0059261_1160 overlap by 1 nucleotidesGa0059261_1160 and Ga0059261_1161 are separated by 18 nucleotidesGa0059261_1161 and Ga0059261_1162 overlap by 4 nucleotidesGa0059261_1162 and Ga0059261_1163 are separated by 152 nucleotides Ga0059261_1159: Ga0059261_1159 - Asparaginase, at 1,186,535 to 1,188,454 _1159 Ga0059261_1160: Ga0059261_1160 - Transcriptional regulators, at 1,188,454 to 1,188,897 _1160 Ga0059261_1161: Ga0059261_1161 - Cu(I)-responsive transcriptional regulator, at 1,188,916 to 1,189,413 _1161 Ga0059261_1162: Ga0059261_1162 - copper-(or silver)-translocating P-type ATPase, at 1,189,410 to 1,191,944 _1162 Ga0059261_1163: Ga0059261_1163 - Copper chaperone, at 1,192,097 to 1,192,294 _1163
Group Condition Ga0059261_1159 Ga0059261_1160 Ga0059261_1161 Ga0059261_1162 Ga0059261_1163
motility inner cut, LB soft agar motility assay +0.4 +0.2 +0.0 +0.4 -1.8
carbon source NAG (C) +0.1 -0.3 -0.1 -0.1 -0.2
carbon source L-Glutamine (C) -0.1 -0.2 +0.1 -0.0 -0.3
pH LB, pH8 -0.1 -0.2 +0.0 +0.1 -0.5
carbon source D-Maltose (C) +0.0 -0.1 +0.1 -0.0 -0.6
carbon source a-Cyclodextrin (C) +0.0 -0.0 +0.1 +0.0 -0.5
nutrient D-Glucose (C); no added vitamins +0.0 -0.0 +0.1 -0.1 -0.4
stress Cisplatin 0.01 mg/ml +0.1 +0.0 +0.0 +0.1 -0.5
pH LB, pH6 -0.0 -0.1 +0.2 +0.0 -0.4
lb LB +0.1 -0.1 +0.2 +0.1 -0.4
carbon source L-Glutamic (C) +0.0 -0.0 +0.1 +0.1 -0.4
stress 1-ethyl-3-methylimidazolium chloride 10 mM +0.1 +0.1 +0.1 +0.0 -0.5
nutrient L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins +0.1 +0.1 +0.1 -0.0 -0.4
stress Cholin acetate 10 mM +0.0 +0.1 -0.1 +0.2 -0.3
carbon source D-Raffinose (C) +0.1 +0.1 +0.3 +0.0 -0.5
nutrient D-Glucose (C); no added vitamins +0.3 -0.1 +0.3 -0.1 -0.4
motility outer cut, LB soft agar motility assay +0.3 -0.1 +0.2 -0.0 -0.2
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins +0.0 +0.1 +0.3 +0.0 -0.2
motility inner cut, LB soft agar motility assay +0.4 +0.2 -0.1 -0.1 -0.1
stress Chlorite 1.25 mM -0.1 -0.1 +0.3 -0.1 +0.3
nutrient D-Cellobiose (C); no added vitamins +0.0 -0.1 +0.5 +0.0 +0.0
stress nitrite 5 mM +0.1 -0.1 +0.2 +0.0 +0.4
stress Choline Lysine 5 mM +0.1 +0.1 -0.1 +0.1 +0.4
stress Lomefloxacin 0.01 mM +0.1 -0.1 +0.2 +0.1 +0.4
stress 1-ethyl-3-methylimidazolium chloride 20 mM +0.1 +0.1 +0.2 +0.1 +0.1
stress Chloride 200 mM +0.0 +0.0 +0.2 +0.0 +0.5
stress Chloramphenicol 0.0001 mg/ml +0.1 -0.0 +0.3 +0.1 +0.4
stress Choline chloride 40 mM +0.0 +0.2 +0.1 +0.1 +0.5
motility outer cut, LB soft agar motility assay +0.1 -0.0 +0.2 +0.4 +0.2
motility inner cut, LB soft agar motility assay +0.1 +0.2 +0.1 -0.1 +0.5
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