Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_1010 and Ga0059261_1011 are separated by 39 nucleotidesGa0059261_1011 and Ga0059261_1012 overlap by 4 nucleotidesGa0059261_1012 and Ga0059261_1013 are separated by 121 nucleotidesGa0059261_1013 and Ga0059261_1014 are separated by 181 nucleotides Ga0059261_1010: Ga0059261_1010 - Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family, at 1,048,268 to 1,048,918 _1010 Ga0059261_1011: Ga0059261_1011 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase, at 1,048,958 to 1,049,995 _1011 Ga0059261_1012: Ga0059261_1012 - EF hand, at 1,049,992 to 1,050,483 _1012 Ga0059261_1013: Ga0059261_1013 - Predicted transcriptional regulators, at 1,050,605 to 1,051,357 _1013 Ga0059261_1014: Ga0059261_1014 - cation diffusion facilitator family transporter, at 1,051,539 to 1,052,528 _1014
Group Condition Ga0059261_1010 Ga0059261_1011 Ga0059261_1012 Ga0059261_1013 Ga0059261_1014
nitrogen source L-Glutamine (N) -3.9 -0.6 -0.0 +0.1 -1.8
nitrogen source L-Proline (N) -2.6 -0.2 +0.0 -0.0 -1.1
nitrogen source L-Glutamine (N) -1.8 -0.6 -0.1 +0.0 -0.7
nitrogen source L-Proline (N) -1.8 -0.2 -0.1 -0.0 -0.8
nitrogen source L-Histidine (N) -1.4 -0.4 -0.2 +0.0 -1.1
nutrient D-Cellobiose (C); no added vitamins -0.8 -0.8 +0.3 -0.1 -1.2
nutrient D-Glucose (C); no added vitamins -1.2 -0.3 -0.2 -0.0 -0.9
stress Rifampicin 0.001 mg/ml -2.0 -0.6 +0.0 +0.1 +0.1
nutrient D-Cellobiose (C); no added vitamins -0.8 -0.6 -0.1 +0.0 -0.8
nutrient D-Glucose (C); no added vitamins -1.5 -0.6 +0.0 -0.0 -0.0
nitrogen source L-Alanine (N) -0.8 -0.4 -0.2 -0.1 -0.6
nitrogen source L-Glutamic (N) -0.8 -0.3 -0.3 -0.1 -0.6
nitrogen source L-Glutamic (N) -0.8 -0.3 -0.1 -0.0 -0.6
motility outer cut, LB soft agar motility assay -0.1 -1.0 +0.1 -0.1 -0.6
stress Fusidic 0.0005 mg/ml -1.3 +0.0 -0.2 -0.0 -0.2
motility inner cut, LB soft agar motility assay -0.2 -1.6 +0.6 +0.3 -0.6
stress Tetracycline 0.0005 mg/ml -0.6 -0.4 -0.1 -0.1 -0.2
carbon source D-Fructose (C) -0.7 -0.2 +0.0 -0.1 -0.5
carbon source NAG (C) -0.5 -0.2 -0.0 +0.0 -0.7
carbon source D-Maltose (C) -0.4 -0.3 -0.1 -0.1 -0.4
carbon source NAG (C) -0.5 -0.3 +0.0 +0.0 -0.6
stress Tetracycline 0.002 mg/ml -0.3 -0.6 -0.2 +0.0 -0.3
stress Sisomicin 0.12 mg/ml -0.1 -1.2 +0.0 +0.2 -0.2
carbon source NAG (C) -0.3 -0.4 +0.1 -0.1 -0.4
carbon source L-Glutamine (C) -0.4 -0.2 -0.2 +0.1 -0.5
motility inner cut, LB soft agar motility assay -0.1 -0.8 +0.1 -0.3 +0.1
stress Bacitracin 0.12 mg/ml -0.6 -0.2 -0.2 +0.2 +0.3
motility outer cut, LB soft agar motility assay -0.5 -0.5 -0.4 +0.3 +0.6
stress Phosphomycin 0.005 mg/ml +0.2 -0.8 +0.1 +0.1 +0.6
motility inner cut, LB soft agar motility assay -0.5 +0.4 +0.8 -0.1 -0.2
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