Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_0886 and Ga0059261_0887 are separated by 66 nucleotidesGa0059261_0887 and Ga0059261_0888 overlap by 4 nucleotidesGa0059261_0888 and Ga0059261_0889 are separated by 350 nucleotidesGa0059261_0889 and Ga0059261_0890 are separated by 64 nucleotides Ga0059261_0886: Ga0059261_0886 - Arabinose efflux permease, at 927,273 to 928,454 _0886 Ga0059261_0887: Ga0059261_0887 - Predicted transcriptional regulators, at 928,521 to 928,853 _0887 Ga0059261_0888: Ga0059261_0888 - Uncharacterized conserved protein, at 928,850 to 929,320 _0888 Ga0059261_0889: Ga0059261_0889 - Cold shock proteins, at 929,671 to 929,877 _0889 Ga0059261_0890: Ga0059261_0890 - hypothetical protein, at 929,942 to 930,160 _0890
Group Condition Ga0059261_0886 Ga0059261_0887 Ga0059261_0888 Ga0059261_0889 Ga0059261_0890
carbon source L-Glutamine (C) -0.1 -0.2 -0.0 -1.2 -0.2
carbon source D-Xylose (C) +0.1 +0.1 -0.1 -1.0 -0.3
stress copper (II) chloride 0.75 mM +0.1 -0.1 -0.1 -1.0 -0.1
carbon source D-Glucose (C) +0.1 +0.3 -0.2 -1.1 -0.1
carbon source D-Xylose (C) +0.1 +0.3 +0.0 -1.0 -0.3
stress sodium fluoride 10 mM +0.2 -0.1 -0.1 -0.7 -0.1
carbon source casaminos (C) +0.0 +0.2 -0.1 -0.9 -0.0
stress Cobalt chloride 0.04 mM +0.0 +0.4 -0.1 -0.9 -0.2
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins +0.0 +0.2 -0.2 -0.5 -0.4
stress Tetracycline 0.001 mg/ml +0.1 -0.0 +0.1 -0.7 -0.3
pH LB, pH8 -0.0 -0.4 +0.1 -0.6 +0.2
stress Cisplatin 0.025 mg/ml +0.1 +0.2 -0.2 -0.7 -0.2
stress A22 0.02 mg/ml -0.0 +0.4 +0.0 -0.9 -0.2
stress Thallium(I) acetate 0.01 mg/ml +0.0 +0.4 -0.1 -0.6 -0.2
motility outer cut, LB soft agar motility assay -0.3 +0.8 +0.0 -1.3 +0.2
stress Chloride 100 mM +0.1 -0.1 +0.2 -0.7 +0.2
motility inner cut, LB soft agar motility assay +0.0 -0.7 +0.2 +0.3 +0.1
nutrient D-Cellobiose (C); no added vitamins +0.2 +0.7 +0.1 -0.4 -0.3
motility outer cut, LB soft agar motility assay +0.1 -0.4 -0.1 +0.3 +0.6
motility inner cut, LB soft agar motility assay -0.4 -0.1 +0.2 +1.2 -0.2
pH LB, pH6 -0.1 -0.4 -0.0 +1.1 +0.1
motility inner cut, LB soft agar motility assay +0.1 +0.2 +0.3 +0.7 -0.6
pH LB, pH6 -0.0 -0.1 -0.1 +0.9 +0.1
stress Cholin acetate 10 mM -0.0 +0.2 -0.2 +0.8 +0.1
stress Choline chloride 20 mM +0.0 +0.1 -0.1 +1.0 -0.0
nitrogen source L-Glutamine (N) -0.1 +0.4 +0.0 +0.7 -0.1
stress 1-ethyl-3-methylimidazolium lysine 10 mM +0.0 +0.4 -0.1 +0.7 +0.0
nitrogen source L-Proline (N) +0.0 +0.7 +0.1 +0.4 -0.2
nitrogen source L-Proline (N) +0.1 +0.7 +0.1 +0.7 -0.1
temperature LB 20C -0.0 +0.6 +0.1 +0.9 +0.1
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