Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_0839 and Ga0059261_0840 are separated by 94 nucleotidesGa0059261_0840 and Ga0059261_0841 overlap by 1 nucleotidesGa0059261_0841 and Ga0059261_0842 are separated by 30 nucleotidesGa0059261_0842 and Ga0059261_0843 are separated by 52 nucleotides Ga0059261_0839: Ga0059261_0839 - Acyl-CoA dehydrogenases, at 879,153 to 880,334 _0839 Ga0059261_0840: Ga0059261_0840 - Acyl-CoA dehydrogenases, at 880,429 to 881,556 _0840 Ga0059261_0841: Ga0059261_0841 - Acyl-CoA thioesterase, at 881,556 to 882,443 _0841 Ga0059261_0842: Ga0059261_0842 - TonB family C-terminal domain, at 882,474 to 883,580 _0842 Ga0059261_0843: Ga0059261_0843 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 883,633 to 884,433 _0843
Group Condition Ga0059261_0839 Ga0059261_0840 Ga0059261_0841 Ga0059261_0842 Ga0059261_0843
motility inner cut, LB soft agar motility assay +0.1 -0.4 +0.1 -0.2 -0.9
stress Doxycycline hyclate 0.0001 mg/ml +0.0 -0.3 -0.2 -0.1 -0.2
stress acetate 40 mM +0.1 -0.2 -0.1 -0.1 -0.3
stress 1-ethyl-3-methylimidazolium acetate 20 mM +0.0 -0.3 -0.0 -0.1 -0.2
nitrogen source L-Glutamic (N) -0.0 -0.3 -0.0 -0.2 -0.0
stress Chloramphenicol 0.001 mg/ml +0.0 -0.1 -0.3 -0.1 -0.1
nitrogen source L-Proline (N) -0.2 +0.0 -0.1 -0.1 -0.1
stress nitrite 10 mM -0.1 -0.3 -0.0 +0.0 -0.2
temperature LB 37C -0.1 -0.2 +0.1 -0.1 -0.2
lb LB +0.1 -0.1 -0.3 -0.1 -0.0
stress Cholin acetate 20 mM +0.1 +0.1 -0.3 -0.1 -0.3
stress acetate 10 mM +0.1 +0.0 -0.1 -0.1 -0.3
carbon source D-Glucose (C) -0.1 +0.2 -0.1 -0.0 -0.3
stress Choline Lysine 5 mM +0.1 +0.0 -0.1 -0.1 -0.2
pH LB, pH6 -0.2 +0.1 -0.1 +0.0 -0.2
motility outer cut, LB soft agar motility assay -0.0 -0.5 +0.4 -0.4 +0.2
pH LB, pH6 +0.0 +0.1 -0.2 +0.1 -0.2
nutrient D-Cellobiose (C); no added vitamins +0.1 -0.1 -0.0 +0.1 -0.3
temperature LB 20C -0.1 -0.1 -0.2 -0.1 +0.2
motility outer cut, LB soft agar motility assay +0.3 -0.5 +0.1 -0.1 +0.1
carbon source L-Glutamic (C) +0.1 -0.3 +0.1 +0.0 -0.1
motility inner cut, LB soft agar motility assay +0.1 -0.4 +0.2 -0.2 +0.2
nutrient D-Glucose (C); no added vitamins -0.2 +0.3 -0.0 -0.1 -0.2
stress Carbenicillin 0.03 mg/ml -0.1 +0.3 -0.2 +0.0 -0.2
stress Gentamicin 0.015 mg/ml -0.0 +0.1 -0.2 +0.1 +0.1
pH LB, pH8 -0.1 +0.4 +0.0 -0.1 -0.1
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins +0.1 -0.3 +0.3 +0.1 +0.1
pH LB, pH6 +0.0 +0.4 +0.1 -0.1 -0.0
motility inner cut, LB soft agar motility assay +0.4 -0.1 +0.1 +0.2 -0.1
motility inner cut, LB soft agar motility assay +0.2 +0.1 +0.6 -0.2 +0.0
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