Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_0834 and Ga0059261_0835 are separated by 30 nucleotidesGa0059261_0835 and Ga0059261_0836 are separated by 146 nucleotidesGa0059261_0836 and Ga0059261_0837 are separated by 138 nucleotidesGa0059261_0837 and Ga0059261_0838 overlap by 8 nucleotides Ga0059261_0834: Ga0059261_0834 - hypothetical protein, at 872,344 to 872,481 _0834 Ga0059261_0835: Ga0059261_0835 - Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II, at 872,512 to 874,260 _0835 Ga0059261_0836: Ga0059261_0836 - Beta-lactamase class C and other penicillin binding proteins, at 874,407 to 875,633 _0836 Ga0059261_0837: Ga0059261_0837 - 3-hydroxyacyl-CoA dehydrogenase, at 875,772 to 877,802 _0837 Ga0059261_0838: Ga0059261_0838 - Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases, at 877,795 to 879,156 _0838
Group Condition Ga0059261_0834 Ga0059261_0835 Ga0059261_0836 Ga0059261_0837 Ga0059261_0838
nutrient D-Glucose (C); no added vitamins -0.2 +0.1 -0.2 -1.1 +0.0
nutrient D-Cellobiose (C); no added vitamins -0.2 +0.1 -0.4 -1.0 +0.2
nutrient D-Glucose (C); no added vitamins +0.3 +0.3 -0.4 -1.1 -0.1
motility outer cut, LB soft agar motility assay -0.9 -0.2 -0.3 +0.2 +0.2
nutrient D-Cellobiose (C); no added vitamins +0.1 +0.2 -0.2 -0.9 -0.0
stress Tetracycline 0.001 mg/ml -0.5 +0.2 -0.1 -0.1 -0.1
nitrogen source L-Histidine (N) +0.2 +0.0 -0.2 -0.5 -0.1
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins -0.2 +0.1 -0.1 -0.4 +0.1
stress acetate 20 mM -0.4 +0.1 -0.0 -0.0 -0.1
nitrogen source L-Proline (N) +0.3 -0.0 -0.2 -0.3 -0.2
stress sodium fluoride 10 mM -0.5 +0.0 +0.2 +0.0 -0.1
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins +0.1 +0.1 -0.1 -0.5 +0.0
stress 1-ethyl-3-methylimidazolium lysine 10 mM -0.4 +0.1 -0.0 -0.1 +0.0
carbon source L-Glutamic (C) -0.5 +0.0 -0.0 +0.2 -0.0
motility inner cut, LB soft agar motility assay -0.5 +0.0 -0.1 -0.1 +0.3
nutrient L-Glutamic (C); no added vitamins +0.2 -0.1 -0.1 -0.3 +0.1
nitrogen source L-Alanine (N) +0.2 -0.0 -0.1 -0.5 +0.1
carbon source D-Fructose (C) +0.2 +0.1 +0.1 -0.4 -0.1
motility inner cut, LB soft agar motility assay -0.5 +0.3 +0.2 -0.2 +0.1
motility outer cut, LB soft agar motility assay +0.1 +0.3 -0.2 -0.2 +0.0
motility inner cut, LB soft agar motility assay +0.1 -0.1 +0.2 -0.2 -0.0
stress Carbenicillin 0.03 mg/ml +0.3 +0.0 -0.1 -0.1 -0.2
motility inner cut, LB soft agar motility assay +0.5 -0.0 -0.2 -0.1 -0.1
carbon source L-Glutamine (C) +0.2 +0.0 +0.2 -0.2 -0.1
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins +0.3 +0.0 -0.1 -0.2 +0.1
stress Gentamicin 0.005 mg/ml +0.2 +0.1 +0.1 -0.1 -0.2
nitrogen source L-Glutamine (N) +0.8 +0.2 -0.0 -0.6 +0.1
pH LB, pH8 +0.5 +0.0 -0.0 -0.1 +0.1
pH LB, pH7 +0.4 -0.1 -0.1 +0.1 +0.1
stress Phosphomycin 0.005 mg/ml +0.5 +0.1 +0.1 +0.0 -0.0
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