Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_0746 and Ga0059261_0747 are separated by 92 nucleotidesGa0059261_0747 and Ga0059261_0748 overlap by 1 nucleotidesGa0059261_0748 and Ga0059261_0749 are separated by 109 nucleotidesGa0059261_0749 and Ga0059261_0750 are separated by 93 nucleotides Ga0059261_0746: Ga0059261_0746 - Predicted permease, DMT superfamily, at 775,534 to 776,433 _0746 Ga0059261_0747: Ga0059261_0747 - Protein of unknown function (DUF2975), at 776,526 to 777,041 _0747 Ga0059261_0748: Ga0059261_0748 - Predicted transcriptional regulator, at 777,041 to 777,250 _0748 Ga0059261_0749: Ga0059261_0749 - Membrane transporters of cations and cationic drugs, at 777,360 to 777,680 _0749 Ga0059261_0750: Ga0059261_0750 - NADH:ubiquinone oxidoreductase subunit 3 (chain A), at 777,774 to 778,151 _0750
Group Condition Ga0059261_0746 Ga0059261_0747 Ga0059261_0748 Ga0059261_0749 Ga0059261_0750
motility inner cut, LB soft agar motility assay -0.4 +0.7 N.D. -0.7 -0.8
stress L-Lysine 50 mM -0.1 -0.3 N.D. -0.1 -0.4
stress 1-ethyl-3-methylimidazolium chloride 20 mM -0.1 -0.3 N.D. -0.6 +0.2
motility outer cut, LB soft agar motility assay -0.6 +0.1 N.D. -0.4 +0.2
stress 1-ethyl-3-methylimidazolium acetate 20 mM +0.2 +0.0 N.D. -0.5 -0.4
motility inner cut, LB soft agar motility assay -0.6 +0.4 N.D. +0.0 -0.4
motility outer cut, LB soft agar motility assay -0.7 +0.6 N.D. -0.7 +0.3
motility inner cut, LB soft agar motility assay -0.5 -0.1 N.D. +0.3 -0.2
nutrient D-Cellobiose (C); no added vitamins +0.1 -0.5 N.D. +0.1 -0.2
carbon source D-Glucose (C) -0.1 +0.1 N.D. +0.1 -0.5
stress 1-ethyl-3-methylimidazolium acetate 5 mM +0.0 -0.4 N.D. -0.2 +0.2
motility inner cut, LB soft agar motility assay -0.0 -0.8 N.D. +0.0 +0.3
stress Cisplatin 0.01 mg/ml -0.2 -0.3 N.D. +0.3 -0.2
stress Chloramphenicol 0.0025 mg/ml -0.2 -0.2 N.D. +0.3 -0.2
carbon source D-Glucose (C) +0.1 -0.4 N.D. +0.4 -0.2
carbon source L-Glutamine (C) -0.1 -0.1 N.D. +0.6 -0.5
carbon source a-Cyclodextrin (C) +0.1 -0.4 N.D. -0.1 +0.3
pH LB, pH8 +0.1 +0.2 N.D. +0.3 -0.3
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins +0.3 -0.4 N.D. +0.4 -0.0
stress nitrite 2.5 mM -0.2 +0.3 N.D. +0.3 -0.1
carbon source NAG (C) +0.2 -0.3 N.D. +0.3 +0.1
carbon source D-Maltose (C) +0.1 -0.3 N.D. +0.2 +0.4
pH LB, pH8 -0.1 +0.1 N.D. +0.5 -0.1
pH LB, pH8 +0.1 +0.3 N.D. +0.3 -0.2
carbon source D-Glucose (C) -0.1 +0.4 N.D. +0.3 -0.1
carbon source D-Xylose (C) +0.1 -0.2 N.D. +0.3 +0.2
carbon source L-Glutamic (C) +0.1 -0.2 N.D. +0.5 +0.2
nutrient D-Glucose (C); no added vitamins +0.3 -0.0 N.D. +0.6 -0.3
pH LB, pH6 +0.3 +0.1 N.D. +0.5 -0.1
stress Tetracycline 0.002 mg/ml -0.1 +0.2 N.D. +0.4 +0.3
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