Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_0656 and Ga0059261_0657 are separated by 17 nucleotidesGa0059261_0657 and Ga0059261_0658 are separated by 119 nucleotidesGa0059261_0658 and Ga0059261_0659 are separated by 4 nucleotidesGa0059261_0659 and Ga0059261_0660 are separated by 28 nucleotides Ga0059261_0656: Ga0059261_0656 - Predicted dehydrogenases and related proteins, at 696,766 to 697,797 _0656 Ga0059261_0657: Ga0059261_0657 - Uncharacterized protein conserved in bacteria, at 697,815 to 698,459 _0657 Ga0059261_0658: Ga0059261_0658 - Beta-lactamase class C and other penicillin binding proteins, at 698,579 to 699,859 _0658 Ga0059261_0659: Ga0059261_0659 - transcriptional regulator, HxlR family, at 699,864 to 700,310 _0659 Ga0059261_0660: Ga0059261_0660 - Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein), at 700,339 to 701,100 _0660
Group Condition Ga0059261_0656 Ga0059261_0657 Ga0059261_0658 Ga0059261_0659 Ga0059261_0660
motility outer cut, LB soft agar motility assay -0.4 -4.1 -0.0 -0.1 +0.9
motility inner cut, LB soft agar motility assay -0.4 -1.6 -0.1 -0.6 -0.0
stress perchlorate 50 mM -0.6 -1.0 +0.0 -0.8 -0.1
motility inner cut, LB soft agar motility assay -0.2 -1.8 -0.1 -0.6 +0.7
temperature LB 20C +0.2 -2.1 +0.0 +0.0 +0.2
stress L-Lysine 50 mM -0.2 -1.6 -0.0 +0.0 +0.2
motility outer cut, LB soft agar motility assay -0.7 -0.8 -0.5 +0.3 +0.5
stress methylglyoxal 0.001 vol% +0.4 -1.3 +0.1 +0.2 +0.0
carbon source NAG (C) -0.1 +1.2 -0.1 -0.6 +0.1
carbon source L-Glutamine (C) -0.6 +1.7 +0.1 -0.2 -0.1
carbon source D-Raffinose (C) -0.2 +1.4 +0.1 -0.4 -0.0
carbon source D-Glucose (C) -0.3 +1.5 -0.1 -0.1 +0.1
carbon source D-Xylose (C) -0.1 +1.6 -0.1 -0.2 -0.0
nutrient D-Glucose (C); no added vitamins -0.2 +1.4 +0.2 +0.3 -0.5
carbon source a-Cyclodextrin (C) +0.4 +1.4 -0.0 -0.2 -0.1
carbon source D-Maltose (C) -0.3 +1.8 +0.0 +0.2 -0.3
nitrogen source L-Proline (N) -0.1 +1.3 -0.1 +0.4 +0.0
nitrogen source L-Proline (N) +0.3 +1.6 +0.0 -0.2 +0.1
nitrogen source L-Glutamine (N) +0.1 +2.2 +0.0 -0.5 -0.0
carbon source D-Glucose (C) -0.0 +1.2 +0.1 +0.6 -0.1
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins +0.1 +1.4 +0.1 +0.5 -0.1
carbon source L-Glutamic (C) +0.0 +1.9 +0.1 -0.0 +0.1
carbon source D-Maltose (C) +0.3 +2.0 +0.0 +0.1 -0.3
nitrogen source L-Histidine (N) +0.2 +1.4 +0.0 +0.3 +0.2
nutrient D-Glucose (C); no added vitamins +0.4 +1.9 +0.2 -0.5 +0.3
carbon source D-Cellobiose (C) +0.1 +1.8 +0.0 +0.2 +0.3
nitrogen source L-Alanine (N) +0.2 +2.0 +0.0 +0.4 +0.1
carbon source D-Cellobiose (C) +0.2 +1.8 +0.0 +0.5 +0.1
nutrient D-Cellobiose (C); no added vitamins +0.7 +1.7 +0.0 -0.1 +0.3
motility inner cut, LB soft agar motility assay +1.6 +2.9 +0.1 +0.6 -0.0
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