Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_0635 and Ga0059261_0636 are separated by 425 nucleotidesGa0059261_0636 and Ga0059261_0637 are separated by 36 nucleotidesGa0059261_0637 and Ga0059261_0638 are separated by 81 nucleotidesGa0059261_0638 and Ga0059261_0639 are separated by 13 nucleotides Ga0059261_0635: Ga0059261_0635 - choice-of-anchor A domain, at 675,109 to 676,173 _0635 Ga0059261_0636: Ga0059261_0636 - valyl-tRNA synthetase (EC 6.1.1.9), at 676,599 to 679,388 _0636 Ga0059261_0637: Ga0059261_0637 - Protein of unknown function (DUF2497), at 679,425 to 679,886 _0637 Ga0059261_0638: Ga0059261_0638 - type I secretion outer membrane protein, TolC family, at 679,968 to 681,488 _0638 Ga0059261_0639: Ga0059261_0639 - Protein-L-isoaspartate carboxylmethyltransferase, at 681,502 to 682,161 _0639
Group Condition Ga0059261_0635 Ga0059261_0636 Ga0059261_0637 Ga0059261_0638 Ga0059261_0639
stress Rifampicin 0.001 mg/ml +0.1 N.D. N.D. -4.9 N.D.
stress Bacitracin 0.12 mg/ml +0.0 N.D. N.D. -4.5 N.D.
stress Polymyxin B sulfate 0.1 mg/ml +0.2 N.D. N.D. -2.4 N.D.
stress Fusidic 0.0005 mg/ml +0.0 N.D. N.D. -2.1 N.D.
stress Polymyxin B sulfate 0.05 mg/ml -0.0 N.D. N.D. -1.0 N.D.
carbon source D-Maltose (C) +0.2 N.D. N.D. -1.1 N.D.
carbon source NAG (C) +0.2 N.D. N.D. -1.0 N.D.
carbon source D-Raffinose (C) +0.2 N.D. N.D. -1.0 N.D.
motility inner cut, LB soft agar motility assay -0.6 N.D. N.D. -0.2 N.D.
motility outer cut, LB soft agar motility assay +0.0 N.D. N.D. -0.7 N.D.
stress benzoic 0.29 mg/ml -0.3 N.D. N.D. -0.4 N.D.
temperature LB 37C -0.1 N.D. N.D. -0.6 N.D.
temperature LB 37C -0.2 N.D. N.D. -0.4 N.D.
carbon source NAG (C) +0.2 N.D. N.D. -0.8 N.D.
stress Tetracycline 0.001 mg/ml -0.0 N.D. N.D. -0.6 N.D.
stress Tetracycline 0.002 mg/ml -0.1 N.D. N.D. -0.4 N.D.
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins +0.2 N.D. N.D. -0.8 N.D.
carbon source D-Raffinose (C) +0.1 N.D. N.D. -0.6 N.D.
carbon source D-Fructose (C) +0.1 N.D. N.D. -0.6 N.D.
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins +0.3 N.D. N.D. -0.8 N.D.
carbon source D-Maltose (C) +0.3 N.D. N.D. -0.8 N.D.
motility outer cut, LB soft agar motility assay +0.1 N.D. N.D. -0.5 N.D.
carbon source a-Cyclodextrin (C) +0.1 N.D. N.D. -0.5 N.D.
carbon source D-Xylose (C) +0.3 N.D. N.D. -0.5 N.D.
motility inner cut, LB soft agar motility assay +0.3 N.D. N.D. -0.3 N.D.
nutrient D-Cellobiose (C); no added vitamins +0.3 N.D. N.D. -0.3 N.D.
nutrient D-Glucose (C); no added vitamins +0.6 N.D. N.D. -0.5 N.D.
nutrient D-Cellobiose (C); no added vitamins +0.4 N.D. N.D. -0.3 N.D.
nutrient D-Glucose (C); no added vitamins +0.5 N.D. N.D. -0.4 N.D.
motility inner cut, LB soft agar motility assay +0.7 N.D. N.D. -0.2 N.D.
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Ga0059261_0635
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Ga0059261_0639
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