Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_0625 and Ga0059261_0626 overlap by 4 nucleotidesGa0059261_0626 and Ga0059261_0627 overlap by 4 nucleotidesGa0059261_0627 and Ga0059261_0628 overlap by 4 nucleotidesGa0059261_0628 and Ga0059261_0629 overlap by 47 nucleotides Ga0059261_0625: Ga0059261_0625 - nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21), at 665,151 to 666,164 _0625 Ga0059261_0626: Ga0059261_0626 - Fructose-2,6-bisphosphatase, at 666,161 to 666,730 _0626 Ga0059261_0627: Ga0059261_0627 - cobalamin-5'-phosphate synthase (EC 2.7.8.26), at 666,727 to 667,443 _0627 Ga0059261_0628: Ga0059261_0628 - L-threonine O-3-phosphate decarboxylase (EC 4.1.1.81), at 667,440 to 668,399 _0628 Ga0059261_0629: Ga0059261_0629 - cobalamin biosynthesis protein CobD, at 668,353 to 669,324 _0629
Group Condition Ga0059261_0625 Ga0059261_0626 Ga0059261_0627 Ga0059261_0628 Ga0059261_0629
motility inner cut, LB soft agar motility assay -0.4 -0.6 -1.3 -0.5 -0.3
motility inner cut, LB soft agar motility assay +0.3 -0.0 -1.8 -0.5 -0.1
stress L-Lysine 50 mM -0.3 -0.5 -1.0 -0.1 +0.0
nitrogen source L-Proline (N) -0.1 -0.5 -0.2 -0.8 -0.1
nutrient D-Cellobiose (C); no added vitamins -0.5 -0.1 -1.1 -0.2 +0.2
stress Chloramphenicol 0.001 mg/ml -0.1 -0.7 -0.6 -0.2 -0.1
carbon source a-Cyclodextrin (C) -0.6 -0.1 -0.9 +0.0 -0.0
nutrient D-Glucose (C); no added vitamins +0.6 -0.8 -1.0 -0.3 +0.0
carbon source D-Maltose (C) -0.3 +0.1 -0.7 -0.4 -0.1
nutrient D-Cellobiose (C); no added vitamins -0.3 -0.3 +0.0 -0.3 -0.4
stress Carbenicillin 0.03 mg/ml +0.0 +0.1 -1.1 -0.1 -0.2
nitrogen source L-Glutamic (N) -0.2 -0.4 -0.8 +0.1 -0.0
stress Tetracycline 0.001 mg/ml +0.3 -0.6 -0.9 -0.1 +0.1
carbon source D-Raffinose (C) -0.1 -0.1 -1.1 +0.1 -0.0
carbon source D-Glucose (C) -0.5 +0.2 -0.8 -0.1 -0.1
stress benzoic 0.145 mg/ml +0.2 -0.1 -0.8 -0.4 -0.0
stress Chloramphenicol 0.0005 mg/ml +0.2 -0.3 -0.8 -0.2 +0.0
stress Tetracycline 0.002 mg/ml +0.2 -0.4 -1.0 +0.2 +0.1
motility outer cut, LB soft agar motility assay -0.0 -0.6 +0.2 -0.7 +0.2
stress Chloramphenicol 0.0025 mg/ml -0.1 -0.6 -0.5 +0.2 +0.1
nutrient D-Glucose (C); no added vitamins +0.2 +0.5 -2.3 +0.9 -0.0
motility inner cut, LB soft agar motility assay +0.1 +0.9 -1.6 -0.2 +0.0
stress Lomefloxacin 0.01 mM -0.2 +0.1 -0.9 +0.3 -0.0
motility outer cut, LB soft agar motility assay +0.3 +0.3 -1.4 +0.0 +0.1
stress Sisomicin 0.12 mg/ml -0.4 +0.2 +0.5 -0.3 -0.0
carbon source D-Glucose (C) +0.2 -0.2 -0.7 +0.3 +0.3
stress 1-ethyl-3-methylimidazolium acetate 20 mM -0.4 +0.0 +1.2 -0.1 +0.1
stress 1-ethyl-3-methylimidazolium chloride 5 mM -0.2 +0.2 +0.8 -0.1 +0.2
pH LB, pH8 -0.2 +0.4 +0.8 +0.0 +0.2
stress Cobalt chloride 0.08 mM +0.3 +0.3 +1.0 +0.0 +0.2
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