Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_0552 and Ga0059261_0553 are separated by 2 nucleotidesGa0059261_0553 and Ga0059261_0554 overlap by 4 nucleotidesGa0059261_0554 and Ga0059261_0555 are separated by 124 nucleotidesGa0059261_0555 and Ga0059261_0556 overlap by 4 nucleotides Ga0059261_0552: Ga0059261_0552 - Predicted dehydrogenases and related proteins, at 566,000 to 567,166 _0552 Ga0059261_0553: Ga0059261_0553 - Sugar phosphate isomerases/epimerases, at 567,169 to 568,218 _0553 Ga0059261_0554: Ga0059261_0554 - Nucleoside H+ symporter, at 568,215 to 569,465 _0554 Ga0059261_0555: Ga0059261_0555 - transcriptional regulator, LacI family, at 569,590 to 570,588 _0555 Ga0059261_0556: Ga0059261_0556 - Signal transduction histidine kinase, at 570,585 to 571,946 _0556
Group Condition Ga0059261_0552 Ga0059261_0553 Ga0059261_0554 Ga0059261_0555 Ga0059261_0556
motility outer cut, LB soft agar motility assay +0.0 -0.1 -0.3 -0.0 -2.3
carbon source a-Cyclodextrin (C) -1.0 -1.2 -0.9 +1.0 -0.2
nutrient L-Glutamic (C); no added vitamins -0.2 -0.1 -0.2 -1.5 +0.0
carbon source a-Cyclodextrin (C) -0.9 -1.2 -1.0 +1.0 +0.2
carbon source D-Fructose (C) +0.2 -0.0 -0.0 -2.1 +0.1
nutrient D-Glucose (C); no added vitamins -0.6 +0.2 -0.2 -0.1 -0.9
nutrient L-Glutamic (C); no added vitamins +0.1 +0.0 -0.1 -1.6 +0.0
nitrogen source L-Histidine (N) -0.1 +0.0 +0.1 -1.6 +0.2
carbon source D-Raffinose (C) -0.7 -1.1 -0.7 +0.9 +0.3
carbon source D-Xylose (C) +0.0 -0.2 -0.1 -1.1 +0.2
nitrogen source L-Glutamine (N) +0.1 +0.0 +0.2 -1.7 +0.3
carbon source D-Glucose (C) +0.0 -0.1 -0.1 -0.8 -0.1
carbon source D-Xylose (C) +0.2 -0.1 -0.1 -1.2 +0.2
nutrient D-Cellobiose (C); no added vitamins -0.2 -0.2 -0.3 +0.4 -0.7
carbon source D-Cellobiose (C) -0.2 -0.2 -0.2 +0.2 -0.5
carbon source D-Cellobiose (C) -0.1 -0.3 -0.2 +0.2 -0.3
nutrient D-Cellobiose (C); no added vitamins -0.2 -0.2 -0.3 +0.3 -0.4
nitrogen source L-Proline (N) +0.1 -0.1 +0.0 -0.7 +0.2
nitrogen source L-Alanine (N) +0.2 -0.2 +0.1 -0.6 +0.2
carbon source L-Glutamine (C) +0.1 -0.1 -0.0 -0.8 +0.6
carbon source L-Glutamine (C) +0.1 -0.0 -0.0 -0.6 +0.4
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins -0.4 -0.2 -0.2 +0.9 -0.2
carbon source D-Maltose (C) -0.3 -0.7 -0.4 +1.2 +0.2
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins -0.4 -0.1 -0.2 +0.9 -0.3
carbon source D-Maltose (C) -0.3 -0.4 -0.2 +0.8 +0.0
motility inner cut, LB soft agar motility assay +0.8 +0.4 -0.2 -0.0 -0.7
carbon source D-Cellobiose (C) -0.2 -0.2 -0.1 +0.3 +0.5
motility inner cut, LB soft agar motility assay -0.4 +0.0 +0.2 -0.0 +0.7
motility inner cut, LB soft agar motility assay +0.5 +0.1 +0.5 +0.1 +0.8
motility outer cut, LB soft agar motility assay +0.7 -0.1 +0.0 +0.3 +1.3
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