Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_0546 and Ga0059261_0547 are separated by 20 nucleotidesGa0059261_0547 and Ga0059261_0548 overlap by 4 nucleotidesGa0059261_0548 and Ga0059261_0549 overlap by 4 nucleotidesGa0059261_0549 and Ga0059261_0550 overlap by 4 nucleotides Ga0059261_0546: Ga0059261_0546 - Choline dehydrogenase and related flavoproteins, at 560,742 to 562,424 _0546 Ga0059261_0547: Ga0059261_0547 - Sugar phosphate isomerases/epimerases, at 562,445 to 563,275 _0547 Ga0059261_0548: Ga0059261_0548 - Gluconate 2-dehydrogenase subunit 3, at 563,272 to 563,841 _0548 Ga0059261_0549: Ga0059261_0549 - Domain of Unknown Function (DUF1080), at 563,838 to 564,653 _0549 Ga0059261_0550: Ga0059261_0550 - Hydroxypyruvate isomerase, at 564,650 to 565,573 _0550
Group Condition Ga0059261_0546 Ga0059261_0547 Ga0059261_0548 Ga0059261_0549 Ga0059261_0550
carbon source a-Cyclodextrin (C) -0.8 -0.6 -0.8 -1.0 -0.6
carbon source a-Cyclodextrin (C) -1.0 -0.6 -0.7 -1.1 -0.5
carbon source D-Raffinose (C) -0.6 -0.3 -0.6 -1.1 -0.9
carbon source D-Maltose (C) -0.4 -0.2 -0.4 -0.4 -0.2
nutrient D-Glucose (C); no added vitamins -0.3 -0.3 -0.6 +0.1 +0.1
carbon source D-Cellobiose (C) -0.1 -0.4 -0.2 -0.2 -0.1
nutrient D-Cellobiose (C); no added vitamins -0.0 -0.3 -0.2 -0.4 -0.0
carbon source D-Cellobiose (C) -0.2 -0.4 -0.3 -0.1 +0.0
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins -0.0 -0.3 -0.3 -0.2 +0.0
carbon source D-Cellobiose (C) -0.2 -0.1 -0.2 -0.1 -0.1
carbon source D-Maltose (C) -0.2 -0.2 -0.1 -0.4 +0.1
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins -0.1 -0.2 -0.3 -0.2 +0.1
nutrient D-Cellobiose (C); no added vitamins -0.2 -0.1 -0.4 +0.0 +0.0
carbon source L-Glutamine (C) +0.0 -0.2 -0.1 -0.1 -0.1
carbon source D-Cellobiose (C) -0.1 -0.2 -0.1 -0.2 +0.1
motility outer cut, LB soft agar motility assay +0.2 -0.5 +0.4 -0.3 -0.1
nitrogen source L-Glutamine (N) +0.1 +0.0 +0.2 -0.1 -0.3
carbon source D-Glucose (C) -0.0 -0.2 -0.2 +0.2 +0.3
stress Cholin acetate 40 mM +0.0 +0.3 -0.1 -0.2 +0.1
stress Paraquat dichloride 0.035 mg/ml +0.1 -0.1 -0.1 +0.1 +0.2
stress Nalidixic 0.05 mg/ml -0.1 +0.1 -0.1 +0.2 +0.1
motility inner cut, LB soft agar motility assay +0.2 -0.3 +0.9 -0.3 -0.1
motility outer cut, LB soft agar motility assay +0.1 +0.0 +0.3 -0.4 +0.4
nutrient D-Glucose (C); no added vitamins -0.1 -0.1 +0.3 +0.2 +0.1
motility inner cut, LB soft agar motility assay +0.0 +0.3 +0.3 -0.4 +0.2
stress 5-Hydroxymethylfurfural 1 mM +0.1 -0.1 +0.1 +0.1 +0.2
temperature LB 20C +0.0 +0.2 +0.2 +0.1 -0.0
stress Nalidixic 0.025 mg/ml +0.0 +0.0 +0.1 +0.2 +0.2
motility inner cut, LB soft agar motility assay +0.0 +0.1 +0.1 +0.4 -0.0
motility inner cut, LB soft agar motility assay -0.1 +0.2 +0.9 +0.2 -0.3
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