Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_0538 and Ga0059261_0539 are separated by 6 nucleotidesGa0059261_0539 and Ga0059261_0540 are separated by 91 nucleotidesGa0059261_0540 and Ga0059261_0541 are separated by 115 nucleotidesGa0059261_0541 and Ga0059261_0542 are separated by 86 nucleotides Ga0059261_0538: Ga0059261_0538 - Phytoene dehydrogenase and related proteins, at 542,309 to 543,916 _0538 Ga0059261_0539: Ga0059261_0539 - Amino acid transporters, at 543,923 to 545,215 _0539 Ga0059261_0540: Ga0059261_0540 - Sulfotransferase family/Tetratricopeptide repeat, at 545,307 to 546,887 _0540 Ga0059261_0541: Ga0059261_0541 - Outer membrane receptor proteins, mostly Fe transport, at 547,003 to 549,501 _0541 Ga0059261_0542: Ga0059261_0542 - type I secretion membrane fusion protein, HlyD family, at 549,588 to 550,799 _0542
Group Condition Ga0059261_0538 Ga0059261_0539 Ga0059261_0540 Ga0059261_0541 Ga0059261_0542
nutrient D-Glucose (C); no added vitamins -0.0 -0.2 -0.2 -0.1 -0.1
temperature LB 30C -0.2 -0.0 -0.0 -0.0 -0.3
temperature LB 20C -0.2 -0.1 +0.1 -0.0 -0.2
carbon source L-Glutamic (C) -0.0 -0.1 -0.2 -0.0 -0.1
nutrient D-Cellobiose (C); no added vitamins -0.1 -0.0 -0.2 -0.0 -0.0
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins -0.1 -0.1 -0.1 -0.1 -0.0
stress L-Lysine 50 mM -0.1 +0.0 -0.1 -0.0 -0.2
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins -0.1 -0.1 -0.0 -0.0 -0.1
stress Cholin acetate 20 mM +0.0 -0.1 -0.1 -0.0 -0.1
motility inner cut, LB soft agar motility assay +0.0 -0.0 +0.0 -0.0 -0.3
nitrogen source L-Glutamine (N) -0.2 +0.0 +0.0 -0.0 -0.2
carbon source D-Glucose (C) -0.1 +0.1 -0.2 -0.1 -0.0
stress Chlorite 1.25 mM -0.0 +0.1 -0.1 -0.0 -0.2
nutrient D-Glucose (C); no added vitamins -0.2 -0.1 -0.1 +0.0 +0.1
stress Fusidic 0.0005 mg/ml -0.1 -0.1 +0.1 -0.0 -0.1
stress 1-ethyl-3-methylimidazolium lysine 10 mM -0.1 -0.0 +0.1 +0.0 -0.1
stress Tetracycline 0.001 mg/ml -0.0 -0.0 +0.1 -0.0 -0.1
stress A22 0.01 mg/ml -0.1 -0.0 +0.1 -0.0 -0.1
stress Cobalt chloride 0.08 mM -0.1 +0.1 +0.0 -0.0 -0.2
stress D-Cycloserine 0.064 mg/ml -0.1 +0.0 +0.1 -0.0 -0.1
stress Furfuryl Alcohol 0.125 vol% -0.0 -0.1 +0.2 -0.0 -0.1
stress Dimethyl Sulfoxide 5 vol% -0.2 +0.1 +0.1 +0.0 -0.1
motility inner cut, LB soft agar motility assay +0.0 +0.3 +0.0 +0.1 -0.3
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins -0.1 -0.0 -0.0 -0.0 +0.2
motility outer cut, LB soft agar motility assay +0.3 +0.1 +0.0 -0.0 -0.2
carbon source NAG (C) -0.0 +0.1 -0.1 +0.0 +0.1
motility inner cut, LB soft agar motility assay -0.2 +0.3 -0.0 +0.1 +0.1
motility inner cut, LB soft agar motility assay -0.1 +0.6 +0.0 -0.1 -0.1
stress nitrite 10 mM +0.0 +0.0 +0.1 +0.1 +0.2
motility outer cut, LB soft agar motility assay -0.0 +0.0 -0.0 +0.2 +0.4
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