Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_0536 and Ga0059261_0537 are separated by 50 nucleotidesGa0059261_0537 and Ga0059261_0538 are separated by 13 nucleotidesGa0059261_0538 and Ga0059261_0539 are separated by 6 nucleotidesGa0059261_0539 and Ga0059261_0540 are separated by 91 nucleotides Ga0059261_0536: Ga0059261_0536 - transcriptional regulator, TetR family, at 540,467 to 541,063 _0536 Ga0059261_0537: Ga0059261_0537 - Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit, at 541,114 to 542,295 _0537 Ga0059261_0538: Ga0059261_0538 - Phytoene dehydrogenase and related proteins, at 542,309 to 543,916 _0538 Ga0059261_0539: Ga0059261_0539 - Amino acid transporters, at 543,923 to 545,215 _0539 Ga0059261_0540: Ga0059261_0540 - Sulfotransferase family/Tetratricopeptide repeat, at 545,307 to 546,887 _0540
Group Condition Ga0059261_0536 Ga0059261_0537 Ga0059261_0538 Ga0059261_0539 Ga0059261_0540
nutrient D-Cellobiose (C); no added vitamins -0.6 -0.3 -0.1 -0.0 -0.2
nutrient D-Cellobiose (C); no added vitamins -0.8 -0.2 -0.0 -0.1 -0.1
nutrient D-Glucose (C); no added vitamins -0.4 -0.1 -0.0 -0.2 -0.2
nutrient L-Glutamic (C); no added vitamins -0.5 -0.1 -0.1 -0.1 -0.1
carbon source NAG (C) -0.7 -0.0 -0.0 -0.2 -0.0
nutrient D-Glucose (C); no added vitamins -0.3 -0.2 -0.2 -0.1 -0.1
carbon source D-Maltose (C) -0.6 -0.0 -0.0 -0.1 +0.0
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins -0.3 -0.2 -0.1 -0.1 -0.0
carbon source D-Maltose (C) -0.6 +0.1 +0.0 -0.1 -0.1
carbon source NAG (C) -0.7 +0.0 +0.0 +0.0 -0.0
nitrogen source L-Histidine (N) -0.4 -0.0 -0.1 -0.0 +0.0
carbon source a-Cyclodextrin (C) -0.3 -0.0 -0.0 -0.1 -0.1
nutrient L-Glutamic (C); no added vitamins -0.3 -0.2 +0.0 -0.0 -0.0
carbon source a-Cyclodextrin (C) -0.4 -0.0 -0.0 -0.1 -0.1
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins -0.4 -0.0 +0.0 -0.0 -0.1
carbon source D-Cellobiose (C) -0.3 -0.1 -0.1 +0.0 -0.0
nitrogen source L-Alanine (N) -0.3 -0.0 -0.2 +0.0 +0.1
carbon source D-Raffinose (C) -0.5 +0.1 -0.0 +0.1 +0.0
nitrogen source L-Proline (N) -0.4 -0.1 -0.0 +0.1 +0.0
carbon source NAG (C) -0.2 -0.1 -0.0 +0.1 -0.1
motility inner cut, LB soft agar motility assay -0.5 +0.0 +0.0 +0.3 +0.0
carbon source D-Raffinose (C) -0.3 +0.1 +0.0 +0.1 -0.0
carbon source NAG (C) -0.4 +0.0 +0.1 +0.1 -0.0
motility inner cut, LB soft agar motility assay -0.1 -0.1 -0.2 +0.3 -0.0
stress Fusidic 0.0005 mg/ml +0.1 +0.0 -0.1 -0.1 +0.1
motility outer cut, LB soft agar motility assay +0.0 -0.3 +0.3 +0.1 +0.0
stress Dimethyl Sulfoxide 5 vol% +0.1 -0.0 -0.2 +0.1 +0.1
motility outer cut, LB soft agar motility assay +0.6 -0.2 -0.0 +0.0 -0.0
stress A22 0.01 mg/ml +0.2 +0.1 -0.1 -0.0 +0.1
motility inner cut, LB soft agar motility assay +0.0 -0.1 -0.1 +0.6 +0.0
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Ga0059261_0536
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Ga0059261_0537
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Ga0059261_0540
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