Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_0535 and Ga0059261_0536 are separated by 57 nucleotidesGa0059261_0536 and Ga0059261_0537 are separated by 50 nucleotidesGa0059261_0537 and Ga0059261_0538 are separated by 13 nucleotidesGa0059261_0538 and Ga0059261_0539 are separated by 6 nucleotides Ga0059261_0535: Ga0059261_0535 - PAP2 superfamily, at 539,594 to 540,409 _0535 Ga0059261_0536: Ga0059261_0536 - transcriptional regulator, TetR family, at 540,467 to 541,063 _0536 Ga0059261_0537: Ga0059261_0537 - Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit, at 541,114 to 542,295 _0537 Ga0059261_0538: Ga0059261_0538 - Phytoene dehydrogenase and related proteins, at 542,309 to 543,916 _0538 Ga0059261_0539: Ga0059261_0539 - Amino acid transporters, at 543,923 to 545,215 _0539
Group Condition Ga0059261_0535 Ga0059261_0536 Ga0059261_0537 Ga0059261_0538 Ga0059261_0539
nutrient D-Cellobiose (C); no added vitamins -0.2 -0.8 -0.2 -0.0 -0.1
nutrient D-Cellobiose (C); no added vitamins -0.1 -0.6 -0.3 -0.1 -0.0
nutrient L-Glutamic (C); no added vitamins -0.2 -0.5 -0.1 -0.1 -0.1
carbon source NAG (C) -0.1 -0.7 -0.0 -0.0 -0.2
nutrient D-Glucose (C); no added vitamins -0.1 -0.3 -0.2 -0.2 -0.1
carbon source D-Maltose (C) -0.0 -0.6 -0.0 -0.0 -0.1
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins -0.1 -0.3 -0.2 -0.1 -0.1
carbon source D-Maltose (C) -0.1 -0.6 +0.1 +0.0 -0.1
carbon source NAG (C) -0.1 -0.7 +0.0 +0.0 +0.0
nutrient D-Glucose (C); no added vitamins +0.1 -0.4 -0.1 -0.0 -0.2
nitrogen source L-Histidine (N) +0.0 -0.4 -0.0 -0.1 -0.0
nutrient L-Glutamic (C); no added vitamins -0.0 -0.3 -0.2 +0.0 -0.0
carbon source D-Raffinose (C) -0.2 -0.5 +0.1 -0.0 +0.1
carbon source a-Cyclodextrin (C) -0.1 -0.4 -0.0 -0.0 -0.1
stress Cisplatin 0.01 mg/ml -0.3 -0.0 -0.1 -0.0 -0.1
carbon source D-Cellobiose (C) -0.1 -0.3 -0.1 -0.1 +0.0
motility inner cut, LB soft agar motility assay -0.6 +0.1 +0.1 +0.0 -0.0
nitrogen source L-Proline (N) -0.1 -0.4 -0.1 -0.0 +0.1
nitrogen source L-Alanine (N) +0.1 -0.3 -0.0 -0.2 +0.0
motility outer cut, LB soft agar motility assay -0.5 +0.0 -0.3 +0.3 +0.1
carbon source D-Raffinose (C) -0.1 -0.3 +0.1 +0.0 +0.1
motility inner cut, LB soft agar motility assay -0.2 -0.1 -0.1 -0.2 +0.3
nitrogen source L-Glutamine (N) +0.1 -0.3 +0.0 -0.1 +0.1
carbon source NAG (C) +0.0 -0.4 +0.0 +0.1 +0.1
motility inner cut, LB soft agar motility assay +0.2 -0.5 +0.0 +0.0 +0.3
stress Aluminum chloride 4 mM +0.2 -0.3 -0.0 +0.0 +0.1
stress A22 0.01 mg/ml -0.1 +0.2 +0.1 -0.1 -0.0
motility inner cut, LB soft agar motility assay -0.2 +0.0 -0.1 -0.1 +0.6
stress Chloramphenicol 0.0005 mg/ml +0.1 +0.2 +0.1 -0.1 -0.0
motility outer cut, LB soft agar motility assay -0.1 +0.6 -0.2 -0.0 +0.0
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Ga0059261_0535
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Ga0059261_0539
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