Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_0337 and Ga0059261_0338 are separated by 84 nucleotidesGa0059261_0338 and Ga0059261_0339 are separated by 81 nucleotidesGa0059261_0339 and Ga0059261_0340 are separated by 14 nucleotidesGa0059261_0340 and Ga0059261_0341 are separated by 85 nucleotides Ga0059261_0337: Ga0059261_0337 - Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II, at 320,926 to 322,545 _0337 Ga0059261_0338: Ga0059261_0338 - DNA-directed DNA polymerase III (polc), at 322,630 to 326,112 _0338 Ga0059261_0339: Ga0059261_0339 - Glutathione peroxidase, at 326,194 to 326,673 _0339 Ga0059261_0340: Ga0059261_0340 - Bacterial protein of unknown function (DUF937), at 326,688 to 327,260 _0340 Ga0059261_0341: Ga0059261_0341 - ABC-type antimicrobial peptide transport system, ATPase component, at 327,346 to 328,020 _0341
Group Condition Ga0059261_0337 Ga0059261_0338 Ga0059261_0339 Ga0059261_0340 Ga0059261_0341
motility inner cut, LB soft agar motility assay +0.1 N.D. -0.5 -0.5 N.D.
motility inner cut, LB soft agar motility assay -0.2 N.D. -0.8 +0.1 N.D.
temperature LB 20C -0.2 N.D. -0.1 -0.5 N.D.
carbon source D-Glucose (C) -0.1 N.D. +0.1 -0.6 N.D.
stress nitrite 5 mM +0.1 N.D. -0.2 -0.3 N.D.
motility outer cut, LB soft agar motility assay +0.1 N.D. +0.6 -1.0 N.D.
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins +0.1 N.D. +0.2 -0.5 N.D.
motility inner cut, LB soft agar motility assay -0.2 N.D. -0.7 +0.7 N.D.
stress Cholin acetate 20 mM -0.1 N.D. +0.2 -0.3 N.D.
nutrient D-Cellobiose (C); no added vitamins -0.1 N.D. -0.3 +0.3 N.D.
motility inner cut, LB soft agar motility assay -0.2 N.D. -0.0 +0.3 N.D.
nutrient D-Cellobiose (C); no added vitamins +0.2 N.D. +0.2 -0.3 N.D.
stress Doxycycline hyclate 0.0001 mg/ml -0.1 N.D. -0.2 +0.4 N.D.
carbon source a-Cyclodextrin (C) -0.1 N.D. +0.1 +0.3 N.D.
carbon source D-Raffinose (C) -0.2 N.D. +0.3 +0.1 N.D.
nitrogen source L-Histidine (N) -0.1 N.D. -0.0 +0.4 N.D.
stress Tetracycline 0.0005 mg/ml -0.1 N.D. -0.1 +0.5 N.D.
carbon source casaminos (C) -0.2 N.D. +0.0 +0.4 N.D.
pH LB, pH8 -0.1 N.D. -0.0 +0.5 N.D.
stress Lomefloxacin 0.02 mM -0.0 N.D. -0.0 +0.5 N.D.
stress Cisplatin 0.01 mg/ml -0.1 N.D. +0.2 +0.4 N.D.
stress Furfuryl Alcohol 0.125 vol% -0.0 N.D. +0.1 +0.4 N.D.
stress Vanillin 1 mM +0.0 N.D. +0.1 +0.4 N.D.
temperature LB 30C +0.1 N.D. +0.1 +0.3 N.D.
carbon source a-Cyclodextrin (C) -0.1 N.D. +0.3 +0.4 N.D.
stress Choline chloride 10 mM +0.0 N.D. +0.0 +0.6 N.D.
pH LB, pH6 +0.1 N.D. +0.2 +0.4 N.D.
motility outer cut, LB soft agar motility assay -0.2 N.D. -0.1 +1.0 N.D.
nutrient D-Glucose (C); no added vitamins +0.1 N.D. +0.0 +0.7 N.D.
nutrient D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins +0.2 N.D. +0.1 +0.5 N.D.
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