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Protein
Homologs
Fitness for 5 genes in
Sphingomonas koreensis DSMZ 15582
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ga0059261_0236 and Ga0059261_0237 are separated by 84 nucleotides
Ga0059261_0237 and Ga0059261_0238 are separated by 44 nucleotides
Ga0059261_0238 and Ga0059261_0239 overlap by 4 nucleotides
Ga0059261_0239 and Ga0059261_0240 overlap by 4 nucleotides
Ga0059261_0236: Ga0059261_0236 - Leucyl aminopeptidase, at 225,867 to 227,426
_0236
Ga0059261_0237: Ga0059261_0237 - phosphoribosylanthranilate isomerase (EC 5.3.1.24), at 227,511 to 228,149
_0237
Ga0059261_0238: Ga0059261_0238 - tryptophan synthase, beta subunit, at 228,194 to 229,405
_0238
Ga0059261_0239: Ga0059261_0239 - tryptophan synthase, alpha chain (EC 4.2.1.20), at 229,402 to 230,202
_0239
Ga0059261_0240: Ga0059261_0240 - acetyl-CoA carboxylase, carboxyl transferase, beta subunit, at 230,199 to 231,059
_0240
Group
Condition
Ga0059261
_0236
Ga0059261
_0237
Ga0059261
_0238
Ga0059261
_0239
Ga0059261
_0240
nutrient
L-Glutamic (C); no added vitamins
+0.2
-7.9
N.D.
-5.5
N.D.
carbon source
D-Cellobiose (C)
+0.2
-7.3
N.D.
-5.5
N.D.
nutrient
L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins
+0.1
-7.1
N.D.
-5.6
N.D.
carbon source
L-Glutamic (C)
+0.1
-8.0
N.D.
-4.6
N.D.
nutrient
L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins
+0.1
-7.8
N.D.
-4.1
N.D.
carbon source
L-Glutamic (C)
+0.2
-7.9
N.D.
-3.9
N.D.
nutrient
D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins
+0.2
-5.9
N.D.
-5.4
N.D.
nutrient
D-Glucose (C); no added vitamins
-0.0
-5.7
N.D.
-5.2
N.D.
nutrient
D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins
-0.1
-7.1
N.D.
-3.5
N.D.
carbon source
D-Cellobiose (C)
+0.2
-6.9
N.D.
-3.9
N.D.
nutrient
D-Cellobiose (C); no added vitamins
+0.1
-5.2
N.D.
-5.3
N.D.
carbon source
a-Cyclodextrin (C)
-0.1
-5.9
N.D.
-4.2
N.D.
carbon source
casaminos (C)
-0.1
-6.1
N.D.
-4.1
N.D.
carbon source
NAG (C)
+0.1
-6.1
N.D.
-4.1
N.D.
carbon source
casaminos (C)
+0.1
-6.1
N.D.
-4.1
N.D.
carbon source
D-Fructose (C)
+0.0
-6.0
N.D.
-4.0
N.D.
carbon source
D-Raffinose (C)
-0.0
-5.9
N.D.
-3.9
N.D.
nutrient
L-Glutamic (C); no added vitamins
+0.2
-6.4
N.D.
-3.6
N.D.
carbon source
D-Cellobiose (C)
+0.1
-5.9
N.D.
-3.9
N.D.
nutrient
D-Glucose (C) and 0.25mM L-Methionine; no added vitamins
+0.1
-5.3
N.D.
-4.3
N.D.
carbon source
a-Cyclodextrin (C)
+0.0
-6.1
N.D.
-3.4
N.D.
nitrogen source
L-Histidine (N)
+0.1
-5.2
N.D.
-4.1
N.D.
carbon source
D-Raffinose (C)
-0.1
-6.0
N.D.
-3.3
N.D.
carbon source
D-Cellobiose (C)
-0.1
-5.2
N.D.
-3.9
N.D.
carbon source
L-Glutamic (C)
-0.0
-5.4
N.D.
-3.6
N.D.
nitrogen source
L-Alanine (N)
+0.0
-5.1
N.D.
-4.0
N.D.
nitrogen source
L-Glutamic (N)
+0.1
-4.9
N.D.
-4.1
N.D.
nitrogen source
L-Glutamic (N)
-0.0
-5.0
N.D.
-3.9
N.D.
carbon source
D-Glucose (C)
+0.1
-3.5
N.D.
-5.5
N.D.
nutrient
D-Glucose (C) and 0.25mM L-Methionine; no added vitamins
+0.1
-4.9
N.D.
-4.0
N.D.
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