Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_0121 and Ga0059261_0122 are separated by 28 nucleotidesGa0059261_0122 and Ga0059261_0123 overlap by 4 nucleotidesGa0059261_0123 and Ga0059261_0124 overlap by 4 nucleotidesGa0059261_0124 and Ga0059261_0125 are separated by 38 nucleotides Ga0059261_0121: Ga0059261_0121 - Sporulation related domain, at 115,162 to 116,040 _0121 Ga0059261_0122: Ga0059261_0122 - D-alanyl-D-alanine carboxypeptidase, at 116,069 to 117,256 _0122 Ga0059261_0123: Ga0059261_0123 - dTMP kinase, at 117,253 to 117,876 _0123 Ga0059261_0124: Ga0059261_0124 - DNA polymerase III, delta subunit, at 117,873 to 118,856 _0124 Ga0059261_0125: Ga0059261_0125 - methionyl-tRNA synthetase (EC 6.1.1.10), at 118,895 to 120,451 _0125
Group Condition Ga0059261_0121 Ga0059261_0122 Ga0059261_0123 Ga0059261_0124 Ga0059261_0125
motility outer cut, LB soft agar motility assay -2.8 N.D. N.D. N.D. N.D.
motility inner cut, LB soft agar motility assay -2.2 N.D. N.D. N.D. N.D.
stress Cobalt chloride 0.08 mM -1.9 N.D. N.D. N.D. N.D.
motility outer cut, LB soft agar motility assay -1.4 N.D. N.D. N.D. N.D.
temperature LB 37C -1.4 N.D. N.D. N.D. N.D.
carbon source D-Maltose (C) -1.3 N.D. N.D. N.D. N.D.
motility inner cut, LB soft agar motility assay -1.3 N.D. N.D. N.D. N.D.
temperature LB 37C -1.2 N.D. N.D. N.D. N.D.
stress Cobalt chloride 0.04 mM -1.2 N.D. N.D. N.D. N.D.
stress copper (II) chloride 0.75 mM -0.9 N.D. N.D. N.D. N.D.
stress L-Lysine 50 mM -0.9 N.D. N.D. N.D. N.D.
stress Polymyxin B sulfate 0.05 mg/ml -0.9 N.D. N.D. N.D. N.D.
pH LB, pH8 -0.8 N.D. N.D. N.D. N.D.
stress Cisplatin 0.025 mg/ml -0.8 N.D. N.D. N.D. N.D.
nitrogen source L-Glutamine (N) -0.8 N.D. N.D. N.D. N.D.
nutrient D-Cellobiose (C); no added vitamins -0.7 N.D. N.D. N.D. N.D.
stress Cisplatin 0.01 mg/ml -0.7 N.D. N.D. N.D. N.D.
carbon source NAG (C) -0.7 N.D. N.D. N.D. N.D.
carbon source a-Cyclodextrin (C) -0.7 N.D. N.D. N.D. N.D.
stress acetate 20 mM -0.7 N.D. N.D. N.D. N.D.
lb LB -0.6 N.D. N.D. N.D. N.D.
carbon source NAG (C) -0.6 N.D. N.D. N.D. N.D.
stress 1-ethyl-3-methylimidazolium chloride 20 mM -0.6 N.D. N.D. N.D. N.D.
stress Tetracycline 0.0005 mg/ml -0.6 N.D. N.D. N.D. N.D.
pH LB, pH8 -0.6 N.D. N.D. N.D. N.D.
stress Phosphomycin 0.005 mg/ml +0.6 N.D. N.D. N.D. N.D.
carbon source NAG (C) +0.7 N.D. N.D. N.D. N.D.
stress Carbenicillin 0.03 mg/ml +0.8 N.D. N.D. N.D. N.D.
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins +1.3 N.D. N.D. N.D. N.D.
nutrient D-Glucose (C); no added vitamins +1.3 N.D. N.D. N.D. N.D.
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