Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

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500 ntGa0059261_0119 and Ga0059261_0120 are separated by 106 nucleotidesGa0059261_0120 and Ga0059261_0121 overlap by 17 nucleotidesGa0059261_0121 and Ga0059261_0122 are separated by 28 nucleotidesGa0059261_0122 and Ga0059261_0123 overlap by 4 nucleotides Ga0059261_0119: Ga0059261_0119 - tRNA, at 113,930 to 114,019 _0119 Ga0059261_0120: Ga0059261_0120 - lytic murein transglycosylase, at 114,126 to 115,178 _0120 Ga0059261_0121: Ga0059261_0121 - Sporulation related domain, at 115,162 to 116,040 _0121 Ga0059261_0122: Ga0059261_0122 - D-alanyl-D-alanine carboxypeptidase, at 116,069 to 117,256 _0122 Ga0059261_0123: Ga0059261_0123 - dTMP kinase, at 117,253 to 117,876 _0123
Group Condition Ga0059261_0119 Ga0059261_0120 Ga0059261_0121 Ga0059261_0122 Ga0059261_0123
motility outer cut, LB soft agar motility assay N.D. -0.2 -2.8 N.D. N.D.
motility inner cut, LB soft agar motility assay N.D. -0.7 -2.2 N.D. N.D.
stress Cobalt chloride 0.08 mM N.D. -0.8 -1.9 N.D. N.D.
motility inner cut, LB soft agar motility assay N.D. -0.9 -1.3 N.D. N.D.
motility outer cut, LB soft agar motility assay N.D. -0.7 -1.4 N.D. N.D.
stress Fusidic 0.0005 mg/ml N.D. -1.8 -0.1 N.D. N.D.
stress Cobalt chloride 0.04 mM N.D. -0.6 -1.2 N.D. N.D.
temperature LB 37C N.D. -0.4 -1.4 N.D. N.D.
temperature LB 37C N.D. -0.4 -1.2 N.D. N.D.
carbon source D-Maltose (C) N.D. -0.1 -1.3 N.D. N.D.
stress Rifampicin 0.001 mg/ml N.D. -0.8 -0.5 N.D. N.D.
stress Cisplatin 0.025 mg/ml N.D. -0.5 -0.8 N.D. N.D.
stress Polymyxin B sulfate 0.05 mg/ml N.D. -0.3 -0.9 N.D. N.D.
stress L-Lysine 50 mM N.D. -0.2 -0.9 N.D. N.D.
stress copper (II) chloride 0.75 mM N.D. -0.1 -0.9 N.D. N.D.
motility inner cut, LB soft agar motility assay N.D. -1.2 +0.1 N.D. N.D.
stress Doxycycline hyclate 0.0001 mg/ml N.D. -0.5 -0.6 N.D. N.D.
pH LB, pH8 N.D. -0.2 -0.8 N.D. N.D.
stress Tetracycline 0.0005 mg/ml N.D. -0.4 -0.6 N.D. N.D.
stress perchlorate 50 mM N.D. -0.6 -0.3 N.D. N.D.
stress nitrate 100 mM N.D. -0.5 -0.4 N.D. N.D.
nutrient D-Cellobiose (C); no added vitamins N.D. +0.3 -0.7 N.D. N.D.
nitrogen source L-Glutamine (N) N.D. +0.9 -0.8 N.D. N.D.
stress Carbenicillin 0.03 mg/ml N.D. +0.1 +0.8 N.D. N.D.
nitrogen source L-Proline (N) N.D. +0.8 +0.2 N.D. N.D.
carbon source NAG (C) N.D. +0.3 +0.7 N.D. N.D.
carbon source NAG (C) N.D. +0.4 +0.6 N.D. N.D.
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins N.D. +0.4 +1.3 N.D. N.D.
nitrogen source L-Proline (N) N.D. +1.3 +0.4 N.D. N.D.
nutrient D-Glucose (C); no added vitamins N.D. +0.6 +1.3 N.D. N.D.
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