Fitness for 5 genes in Sphingomonas koreensis DSMZ 15582

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 166 experiments or choose conditions or try the comparative fitness browser

500 ntGa0059261_0060 and Ga0059261_0061 are separated by 147 nucleotidesGa0059261_0061 and Ga0059261_0062 are separated by 33 nucleotidesGa0059261_0062 and Ga0059261_0063 overlap by 4 nucleotidesGa0059261_0063 and Ga0059261_0064 overlap by 4 nucleotides Ga0059261_0060: Ga0059261_0060 - Uncharacterized conserved protein, at 53,052 to 53,375 _0060 Ga0059261_0061: Ga0059261_0061 - nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19), at 53,523 to 54,368 _0061 Ga0059261_0062: Ga0059261_0062 - hypothetical protein, at 54,402 to 54,854 _0062 Ga0059261_0063: Ga0059261_0063 - Ribonuclease I, at 54,851 to 55,549 _0063 Ga0059261_0064: Ga0059261_0064 - Domain of unknown function (DUF4112), at 55,546 to 55,965 _0064
Group Condition Ga0059261_0060 Ga0059261_0061 Ga0059261_0062 Ga0059261_0063 Ga0059261_0064
motility inner cut, LB soft agar motility assay -0.7 N.D. -1.2 -0.2 +0.0
motility outer cut, LB soft agar motility assay -0.9 N.D. -0.2 +0.3 -1.0
motility inner cut, LB soft agar motility assay -1.0 N.D. +0.4 +0.0 -0.9
pH LB, pH8 -0.4 N.D. -0.3 +0.0 -0.3
temperature LB 20C +0.2 N.D. -0.8 +0.0 -0.2
motility inner cut, LB soft agar motility assay +0.2 N.D. -0.6 +0.1 -0.4
stress Nickel (II) chloride 1.5 mM +0.0 N.D. -0.6 -0.2 +0.1
carbon source D-Xylose (C) -0.3 N.D. +0.5 -0.3 +0.2
nitrogen source L-Glutamine (N) +0.6 N.D. -0.3 +0.1 -0.1
stress copper (II) chloride 0.75 mM +0.7 N.D. -0.0 -0.0 -0.3
nutrient D-Cellobiose (C); no added vitamins +1.2 N.D. -0.8 -0.1 +0.0
carbon source NAG (C) +0.6 N.D. +0.1 -0.1 -0.3
stress Cephalothin 0.3 mg/ml +0.6 N.D. +0.1 -0.0 -0.3
stress Nalidixic 0.05 mg/ml +0.5 N.D. +0.1 -0.3 +0.1
stress Polymyxin B sulfate 0.1 mg/ml +0.6 N.D. +0.1 -0.3 +0.0
carbon source NAG (C) +0.8 N.D. -0.1 -0.2 +0.1
motility outer cut, LB soft agar motility assay -1.3 N.D. +0.9 +0.6 +0.5
carbon source D-Maltose (C) +0.8 N.D. -0.0 -0.2 +0.0
stress perchlorate 50 mM +0.3 N.D. +0.3 -0.1 +0.2
stress Sisomicin 0.12 mg/ml +0.1 N.D. +0.7 -0.1 +0.1
stress L-Lysine 50 mM +0.4 N.D. +0.7 -0.3 +0.1
stress 1-ethyl-3-methylimidazolium chloride 5 mM +0.3 N.D. +0.4 +0.1 +0.2
nutrient D-Glucose (C) and 0.25mM L-Methionine; no added vitamins +0.5 N.D. +0.0 +0.3 +0.1
stress Chlorite 0.5 mM +0.5 N.D. +0.5 +0.0 -0.1
stress acetate 10 mM +0.6 N.D. +0.2 +0.0 +0.3
carbon source D-Xylose (C) +0.4 N.D. +0.6 +0.1 +0.2
nutrient D-Cellobiose (C); no added vitamins +1.5 N.D. -0.1 +0.2 -0.0
motility inner cut, LB soft agar motility assay +0.1 N.D. +1.2 +0.1 +0.2
nutrient D-Glucose (C); no added vitamins +1.5 N.D. +0.4 +0.1 +0.1
nutrient D-Glucose (C); no added vitamins +1.3 N.D. +0.5 +0.2 +0.3
remove
Ga0059261_0060
plot		 remove
Ga0059261_0061
plot		 remove
Ga0059261_0062		 remove
Ga0059261_0063
plot		 remove
Ga0059261_0064
plot