Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_1024 and Psest_1025 overlap by 1 nucleotidesPsest_1025 and Psest_1026 are separated by 11 nucleotidesPsest_1026 and Psest_1028 are separated by 205 nucleotidesPsest_1028 and Psest_1029 are separated by 111 nucleotides Psest_1024: Psest_1024 - ABC-type Fe3+-siderophore transport system, permease component, at 1,110,560 to 1,111,597 _1024 Psest_1025: Psest_1025 - ABC-type hemin transport system, ATPase component, at 1,111,597 to 1,112,364 _1025 Psest_1026: Psest_1026 - Uncharacterized iron-regulated protein, at 1,112,376 to 1,113,260 _1026 Psest_1028: Psest_1028 - Cyclic nucleotide-binding domain., at 1,113,466 to 1,114,263 _1028 Psest_1029: Psest_1029 - Regulator of competence-specific genes, at 1,114,375 to 1,114,638 _1029
Group Condition Psest_1024 Psest_1025 Psest_1026 Psest_1028 Psest_1029
stress Thallium(I) acetate 0.08 mg/ml +0.0 -0.3 -1.2 -0.2 -0.8
RCH2 grown on a colony of Serratia +0.1 +0.5 -0.3 -0.1 -1.7
stress Cisplatin 0.003 mg/ml +0.1 +0.0 -1.2 +0.4 -0.9
carbon source propionate (C) +0.7 -0.1 -0.7 -0.3 -0.9
stress Vanillin 2 mM -0.3 +0.4 +0.2 -0.3 -1.2
stress nitrite 2.5 mM +0.3 +0.6 -0.9 +0.3 -1.1
nitrogen source Putrescine (N) +0.1 -0.2 +0.6 +0.1 -1.2
stress 2-Furfuraldehyde 0.05 vol% +0.1 -0.2 -1.1 +0.1 +0.5
stress nitrate 250 mM +0.1 -0.6 +0.3 -0.8 +0.4
stress L-Lysine 200 mM -0.7 -0.6 -0.3 +0.1 +1.1
anaerobic Nitrite/ lactate media with Nitrite 20mM -0.2 -0.4 +0.7 +0.1 -0.6
RCH2 grown on a colony of N2C3 +0.3 +0.3 -1.8 -0.0 +1.0
metal limitation Lactate-nitrite; anaerobic; with copper; sample2 -0.3 -0.2 -0.6 +0.1 +0.8
RCH2 grown on a colony of ecoli +0.2 -0.9 -0.3 -0.1 +1.0
metal limitation Lactate-nitrite with YE; anaerobic; with copper; sample3 -0.3 -0.3 -0.5 +0.2 +1.0
temperature LB 30C timecourse2 timepoint 2 +0.2 +0.3 +0.5 +0.5 -1.3
stress Cobalt chloride 0.08 mM +0.1 +0.4 -1.5 +0.3 +0.8
stress Spectinomycin 0.00625 mg/ml -0.2 -0.3 +1.2 +0.0 -0.4
RCH2 grown on a colony of N2A2 -0.3 -0.4 +0.4 +0.1 +0.8
stress Furfuryl Alcohol 0.3 vol% -0.0 -0.6 +0.6 -0.1 +0.8
stress Nickel (II) chloride 0.75 mM +0.1 +0.3 -0.7 +0.2 +0.7
stress Nalidixic 0.00390625 mg/ml +0.7 -0.3 -1.2 +0.3 +1.3
RCH2 grown on a colony of N2F3 +0.3 +0.7 +0.6 -0.5 +0.4
stress Cobalt chloride 0.07 mM +0.5 +0.4 -0.1 +0.2 +1.0
stress Cephalothin 0.04 mg/ml +0.7 +0.5 +0.3 +0.0 +0.6
stress Carbenicillin 0.008 mg/ml +0.3 +0.7 +0.7 +0.2 +0.3
vitamin With vitamins t2 +0.1 +0.4 +1.0 +0.1 +0.7
stress Def Carbenicillin 0.008 mg/ml +0.8 +0.7 +0.4 -0.6 +1.3
stress Def Carbenicillin 0.02 mg/ml +0.4 +0.3 +0.4 +0.4 +1.3
RCH2 grown on a colony of Serratia -0.1 +1.0 +1.5 +0.1 +0.3
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