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Protein
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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_1017 and Psest_1018 are separated by 108 nucleotides
Psest_1018 and Psest_1019 are separated by 145 nucleotides
Psest_1019 and Psest_1020 are separated by 17 nucleotides
Psest_1020 and Psest_1021 are separated by 78 nucleotides
Psest_1017: Psest_1017 - Protein of unknown function (DUF3426)., at 1,103,316 to 1,104,563
_1017
Psest_1018: Psest_1018 - ribosomal protein L11 methyltransferase, at 1,104,672 to 1,105,553
_1018
Psest_1019: Psest_1019 - acetyl-CoA carboxylase, biotin carboxylase subunit, at 1,105,699 to 1,107,048
_1019
Psest_1020: Psest_1020 - acetyl-CoA carboxylase, biotin carboxyl carrier protein, at 1,107,066 to 1,107,521
_1020
Psest_1021: Psest_1021 - 3-dehydroquinate dehydratase, type II, at 1,107,600 to 1,108,043
_1021
Group
Condition
Psest
_1017
Psest
_1018
Psest
_1019
Psest
_1020
Psest
_1021
stress
Def Benzalkonium Chloride 0.002 mg/ml
-1.2
+0.0
N.D.
N.D.
N.D.
stress
nitrate 250 mM
-0.9
-0.1
N.D.
N.D.
N.D.
stress
Furfuryl Alcohol 0.05 vol%
-0.6
-0.4
N.D.
N.D.
N.D.
stress
methylglyoxal 0.0016 vol%
-0.5
-0.5
N.D.
N.D.
N.D.
carbon source
L-Alanine (C)
+0.2
-0.8
N.D.
N.D.
N.D.
RCH2 grown on a colony of N2A2
+0.4
-0.8
N.D.
N.D.
N.D.
stress
Def Vancomycin 0.008 mg/ml
+0.4
-0.7
N.D.
N.D.
N.D.
stress
Paraquat dichloride 0.015 mg/ml
+0.4
-0.7
N.D.
N.D.
N.D.
stress
Benzethonium chloride 0.0125 mM
+0.6
-0.7
N.D.
N.D.
N.D.
stress
Nickel (II) chloride 0.75 mM
-0.6
+0.5
N.D.
N.D.
N.D.
stress
Benzethonium chloride 0.0125 mM
+0.6
-0.6
N.D.
N.D.
N.D.
stress
Phosphomycin 0.012 mg/ml
+0.9
-0.4
N.D.
N.D.
N.D.
nutrient
Min media with glucose
+0.9
-0.2
N.D.
N.D.
N.D.
vitamin
No vitamins t1
+1.1
-0.3
N.D.
N.D.
N.D.
stress
perchlorate 12.5 mM
+0.4
+0.6
N.D.
N.D.
N.D.
nutrient
Min media with glucose
+0.9
+0.1
N.D.
N.D.
N.D.
stress
Carbenicillin 0.0065 mg/ml
+1.3
-0.1
N.D.
N.D.
N.D.
stress
Carbenicillin 0.0065 mg/ml
+1.3
-0.1
N.D.
N.D.
N.D.
stress
Bacitracin 0.25 mg/ml
+1.1
+0.1
N.D.
N.D.
N.D.
stress
D-Cycloserine 0.032 mg/ml
+0.4
+0.8
N.D.
N.D.
N.D.
nutrient
L-Histidine
+1.4
-0.1
N.D.
N.D.
N.D.
carbon source
L-tyrosine (C)
+0.6
+0.7
N.D.
N.D.
N.D.
nutrient
L-Histidine
+1.2
+0.0
N.D.
N.D.
N.D.
nutrient
L-tyrosine
+1.4
-0.0
N.D.
N.D.
N.D.
vitamin
No vitamins t2
+1.2
+0.1
N.D.
N.D.
N.D.
stress
Bacitracin 0.25 mg/ml
+0.8
+0.6
N.D.
N.D.
N.D.
nutrient
L-tyrosine
+1.6
-0.1
N.D.
N.D.
N.D.
stress
Vancomycin 0.016 mg/ml
+1.2
+0.3
N.D.
N.D.
N.D.
stress
Carbenicillin 0.008 mg/ml
+2.5
-0.7
N.D.
N.D.
N.D.
stress
Carbenicillin 0.008 mg/ml
+2.6
-0.0
N.D.
N.D.
N.D.
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