Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_1012 and Psest_1013 are separated by 74 nucleotidesPsest_1013 and Psest_1014 are separated by 199 nucleotidesPsest_1014 and Psest_1015 are separated by 76 nucleotidesPsest_1015 and Psest_1016 overlap by 4 nucleotides Psest_1012: Psest_1012 - Signal transduction histidine kinase, at 1,095,694 to 1,098,540 _1012 Psest_1013: Psest_1013 - phosphoribosylamine--glycine ligase, at 1,098,615 to 1,099,907 _1013 Psest_1014: Psest_1014 - phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase, at 1,100,107 to 1,101,711 _1014 Psest_1015: Psest_1015 - Factor for inversion stimulation Fis, transcriptional activator, at 1,101,788 to 1,102,108 _1015 Psest_1016: Psest_1016 - putative TIM-barrel protein, nifR3 family, at 1,102,105 to 1,103,118 _1016
Group Condition Psest_1012 Psest_1013 Psest_1014 Psest_1015 Psest_1016
stress Def Fusidic 0.032 mg/ml -3.8 -3.9 N.D. N.D. +0.1
temperature Glucose defined 30C timecourse1 timepoint 3 -2.7 -4.0 N.D. N.D. -0.5
temperature Glucose defined media 37C sample1 -3.3 -3.6 N.D. N.D. -0.2
stress Def Vancomycin 0.008 mg/ml -2.7 -3.6 N.D. N.D. -0.3
temperature LB 30C timecourse1 timepoint 3 -2.8 -3.1 N.D. N.D. -0.5
temperature Glucose defined media 26C sample1 -2.8 -3.4 N.D. N.D. -0.3
carbon source RCH2 defined media -2.4 -3.7 N.D. N.D. -0.2
stress Def Neomycin 0.0008 mg/ml -2.3 -3.2 N.D. N.D. -0.8
temperature Glucose defined 30C timecourse1 timepoint 2 -1.9 -4.0 N.D. N.D. -0.3
carbon source L-Glutamic (C) -3.9 -2.5 N.D. N.D. +0.3
carbon source Glucose defined media -2.0 -3.9 N.D. N.D. -0.2
stress Def Phosphomycin 0.125 mg/ml -2.4 -3.5 N.D. N.D. -0.2
stress Def Thallium(I) acetate 0.125 mg/ml -2.6 -3.4 N.D. N.D. +0.0
carbon source butyrate (C) -3.7 -1.6 N.D. N.D. -0.6
carbon source D-Maltose (C) -3.0 -2.1 N.D. N.D. -0.8
carbon source butyrate (C) -2.6 -2.3 N.D. N.D. -0.9
stress Def Fusidic 0.064 mg/ml -2.9 -3.2 N.D. N.D. +0.2
carbon source butyrate (C) -3.5 -1.9 N.D. N.D. -0.4
stress Def Lomefloxacin 0.00004 mM -2.1 -3.7 N.D. N.D. -0.0
carbon source Glucose defined media -1.7 -3.9 N.D. N.D. -0.2
stress Def methylglyoxal 0.01 vol% -2.0 -3.4 N.D. N.D. -0.3
stress Def Cisplatin 0.0002 mg/ml -1.7 -4.0 N.D. N.D. +0.2
carbon source L-Glutamine (C) -3.4 -2.2 N.D. N.D. +0.3
stress Def Polymyxin B sulfate 0.0001 mg/ml -2.9 -2.6 N.D. N.D. +0.4
carbon source L-Leucine (C) -3.0 -2.4 N.D. N.D. +0.4
stress Def sodium fluoride 25 mM -1.3 -4.1 N.D. N.D. +0.5
stress Choline chloride 90 mM -2.9 -1.5 N.D. N.D. +1.7
stress nitrite 2.5 mM -3.2 +2.7 N.D. N.D. -0.1
stress nitrate 250 mM -2.5 +3.0 N.D. N.D. -0.4
stress Bacitracin 0.25 mg/ml -2.4 +3.3 N.D. N.D. +0.1
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