Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_1004 and Psest_1005 overlap by 1 nucleotidesPsest_1005 and Psest_1006 are separated by 263 nucleotidesPsest_1006 and Psest_1007 are separated by 115 nucleotidesPsest_1007 and Psest_1008 are separated by 41 nucleotides Psest_1004: Psest_1004 - Aspartate/tyrosine/aromatic aminotransferase, at 1,088,935 to 1,090,107 _1004 Psest_1005: Psest_1005 - sugar fermentation stimulation protein, at 1,090,107 to 1,090,814 _1005 Psest_1006: Psest_1006 - dTDP-4-dehydrorhamnose reductase, at 1,091,078 to 1,091,998 _1006 Psest_1007: Psest_1007 - Predicted permeases, at 1,092,114 to 1,093,013 _1007 Psest_1008: Psest_1008 - hypothetical protein, at 1,093,055 to 1,093,216 _1008
Group Condition Psest_1004 Psest_1005 Psest_1006 Psest_1007 Psest_1008
RCH2 grown on a colony of 8R2A -0.1 +0.1 -0.3 +0.0 -4.9
RCH2 grown on a colony of Serratia -0.3 -1.0 -0.4 +0.2 -3.6
stress Chlorate 75 mM -0.4 +0.1 +0.3 +0.1 -3.9
carbon source casaminos (C) -0.1 +0.2 -0.3 -0.0 -2.9
nitrogen source L-Citrulline (N) -0.1 -0.3 -2.0 -0.0 -0.6
nitrogen source Adenine (N) -0.1 -0.3 -0.1 -0.2 -2.3
stress nitrate 200 mM -0.1 -0.5 -0.2 +0.3 -2.2
stress Cisplatin 0.0016 mg/ml -0.1 -1.0 -0.0 +0.2 -1.7
temperature LB 30C timecourse1 timepoint 3 -0.2 -0.4 -0.8 -0.2 -1.1
stress perchlorate 25 mM -0.1 -0.5 +0.3 -0.3 -1.7
nitrogen source L-Glutamic (N) +0.0 -0.2 -0.4 +0.3 -1.9
carbon source Glycerol (C) -0.1 +0.3 -0.2 -0.1 -2.0
radiation Ionizing radiation, 319.06 Gy, +0.2 -0.3 -0.6 +0.2 -1.4
carbon source L-tyrosine (C) +0.3 +0.8 -1.4 +0.3 -1.9
stress Vanillin 2 mM -0.2 +0.6 -0.4 -0.3 -1.4
stress Furfuryl Alcohol 0.05 vol% -0.4 -0.8 +0.5 +0.2 -1.0
carbon source propionate (C) +0.8 -0.8 +0.2 -0.1 -1.5
stress Benzethonium chloride 0.0125 mM +0.1 +0.6 +0.1 -0.3 -1.7
nitrogen source L-Citrulline (N) -0.2 +0.2 -1.9 -0.0 +1.1
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 +0.1 +0.8 -0.4 +0.1 -1.5
carbon source L-tyrosine (C) +0.4 -0.4 -0.9 +0.6 -0.5
stress Cephalothin 0.04 mg/ml +0.5 -0.2 -0.2 +0.6 -1.4
stress Benzethonium chloride 0.01 mM +0.3 +0.7 +0.4 -0.5 -1.2
stress Def 2-Furfuraldehyde 0.032 vol% +0.8 -0.2 +0.5 +0.4 -1.5
RCH2 grown on a colony of N2F3 -0.6 -0.9 +1.1 -0.4 +1.5
stress Doxycycline hyclate 0.0002 mg/ml -0.3 +0.3 -0.0 -0.6 +1.4
stress Lactate-nitrate; anaerobic; cadmium stress sample3 +0.1 +0.1 +0.2 +0.0 +2.5
stress Lactate-nitrate; anaerobic; copper stress sample2 +0.2 -0.1 +0.3 +0.3 +2.8
carbon source propionate (C) +0.7 -0.1 +1.2 +0.0 +2.3
RCH2 grown on a colony of N2A2 +0.3 +0.5 -0.4 +0.7 +3.3
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