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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_0994 and Psest_0995 are separated by 83 nucleotides
Psest_0995 and Psest_0996 overlap by 4 nucleotides
Psest_0996 and Psest_0997 are separated by 123 nucleotides
Psest_0997 and Psest_0998 are separated by 1 nucleotides
Psest_0994: Psest_0994 - L-aspartate-alpha-decarboxylase, at 1,077,686 to 1,078,066
_0994
Psest_0995: Psest_0995 - pantoate--beta-alanine ligase, at 1,078,150 to 1,079,010
_0995
Psest_0996: Psest_0996 - 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 1,079,007 to 1,079,807
_0996
Psest_0997: Psest_0997 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, at 1,079,931 to 1,080,458
_0997
Psest_0998: Psest_0998 - poly(A) polymerase, at 1,080,460 to 1,081,854
_0998
Group
Condition
Psest
_0994
Psest
_0995
Psest
_0996
Psest
_0997
Psest
_0998
stress
Neomycin 0.004 mg/ml
-0.1
N.D.
N.D.
N.D.
-4.2
stress
Benzethonium chloride 0.0125 mM
+0.3
N.D.
N.D.
N.D.
-3.4
stress
Gentamicin 0.0016 mg/ml
+0.7
N.D.
N.D.
N.D.
-3.7
stress
Chlorite 0.06 mM
-0.0
N.D.
N.D.
N.D.
-3.0
RCH2 grown on a colony of N2A2
-0.2
N.D.
N.D.
N.D.
-2.7
stress
Polymyxin B sulfate 0.0001 mg/ml
-0.6
N.D.
N.D.
N.D.
-2.3
nitrogen source
L-Alanine (N)
+0.1
N.D.
N.D.
N.D.
-3.0
stress
nitrate 250 mM
+0.7
N.D.
N.D.
N.D.
-3.5
stress
Furfuryl Alcohol 0.05 vol%
-0.2
N.D.
N.D.
N.D.
-2.5
stress
Cisplatin 0.003 mg/ml
+0.0
N.D.
N.D.
N.D.
-2.6
RCH2 grown on a colony of Serratia
-0.7
N.D.
N.D.
N.D.
-1.8
stress
Bacitracin 0.25 mg/ml
-0.0
N.D.
N.D.
N.D.
-2.3
stress
acetate 80 mM
-0.1
N.D.
N.D.
N.D.
-2.1
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
-0.5
N.D.
N.D.
N.D.
-1.8
stress
Neomycin 0.004 mg/ml
+0.0
N.D.
N.D.
N.D.
-2.3
stress
Benzalkonium Chloride 0.002 mg/ml
+0.2
N.D.
N.D.
N.D.
-2.4
stress
Fusidic 0.016 mg/ml
-0.1
N.D.
N.D.
N.D.
-2.0
stress
Neomycin 0.004 mg/ml
+0.4
N.D.
N.D.
N.D.
-2.4
stress
benzoic 0.4 mg/ml
+0.2
N.D.
N.D.
N.D.
-2.1
stress
A22 0.005 mg/ml
+0.3
N.D.
N.D.
N.D.
-2.1
stress
Cisplatin 0.0016 mg/ml
+0.3
N.D.
N.D.
N.D.
-2.1
stress
Nalidixic 0.00390625 mg/ml
+0.5
N.D.
N.D.
N.D.
-2.2
stress
Nickel (II) chloride 0.8 mM
+0.2
N.D.
N.D.
N.D.
-2.0
stress
Fusidic 0.016 mg/ml
+0.6
N.D.
N.D.
N.D.
-2.0
stress
Benzethonium chloride 0.01 mM
+0.4
N.D.
N.D.
N.D.
-1.6
stress
Def Benzethonium chloride 0.008 mM
+0.7
N.D.
N.D.
N.D.
-1.8
stress
Def Benzalkonium Chloride 0.002 mg/ml
+1.4
N.D.
N.D.
N.D.
-2.2
stress
Def Carbenicillin 0.008 mg/ml
+1.2
N.D.
N.D.
N.D.
-1.9
stress
Choline Lysine 20 mM
+1.1
N.D.
N.D.
N.D.
-1.5
stress
Cephalothin 0.04 mg/ml
+1.5
N.D.
N.D.
N.D.
-1.8
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