Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0960 and Psest_0961 are separated by 95 nucleotidesPsest_0961 and Psest_0962 are separated by 58 nucleotidesPsest_0962 and Psest_0963 are separated by 203 nucleotidesPsest_0963 and Psest_0964 are separated by 99 nucleotides Psest_0960: Psest_0960 - Small protein A (tmRNA-binding), at 1,040,735 to 1,041,250 _0960 Psest_0961: Psest_0961 - Fe2+/Zn2+ uptake regulation proteins, at 1,041,346 to 1,041,750 _0961 Psest_0962: Psest_0962 - DNA repair protein RecN, at 1,041,809 to 1,043,482 _0962 Psest_0963: Psest_0963 - Molecular chaperone GrpE (heat shock protein), at 1,043,686 to 1,044,255 _0963 Psest_0964: Psest_0964 - chaperone protein DnaK, at 1,044,355 to 1,046,268 _0964
Group Condition Psest_0960 Psest_0961 Psest_0962 Psest_0963 Psest_0964
stress Cisplatin 0.003 mg/ml N.D. N.D. -3.2 N.D. N.D.
stress Cisplatin 0.003 mg/ml N.D. N.D. -3.2 N.D. N.D.
stress Cisplatin 0.0016 mg/ml N.D. N.D. -2.3 N.D. N.D.
stress Def Cisplatin 0.0002 mg/ml N.D. N.D. -2.2 N.D. N.D.
stress Cisplatin 0.0016 mg/ml N.D. N.D. -2.1 N.D. N.D.
stress Nalidixic 0.001 mg/ml N.D. N.D. -1.6 N.D. N.D.
stress Def Nalidixic 0.001 mg/ml N.D. N.D. -1.3 N.D. N.D.
stress D-Cycloserine 0.032 mg/ml N.D. N.D. -1.1 N.D. N.D.
stress nitrate 200 mM N.D. N.D. -1.0 N.D. N.D.
stress methylglyoxal 0.0016 vol% N.D. N.D. -1.0 N.D. N.D.
stress Benzalkonium Chloride 0.002 mg/ml N.D. N.D. -1.0 N.D. N.D.
stress Lactate-nitrate; anaerobic; dichromate stress sample3 N.D. N.D. -1.0 N.D. N.D.
stress Lactate-nitrate; anaerobic; dichromate stress sample1 N.D. N.D. -0.9 N.D. N.D.
stress Lactate-nitrate; anaerobic; dichromate stress sample2 N.D. N.D. -0.9 N.D. N.D.
temperature LB 30C timecourse1 timepoint 3 N.D. N.D. -0.8 N.D. N.D.
lb LB N.D. N.D. -0.8 N.D. N.D.
stress Def Cephalothin 0.04 mg/ml N.D. N.D. -0.8 N.D. N.D.
stress Lomefloxacin 0.0001 mM N.D. N.D. -0.8 N.D. N.D.
stress Choline chloride 90 mM N.D. N.D. -0.7 N.D. N.D.
stress Def methylglyoxal 0.01 vol% N.D. N.D. -0.7 N.D. N.D.
radiation Ionizing radiation, 319.06 Gy, N.D. N.D. -0.7 N.D. N.D.
stress Def Nalidixic 0.0005 mg/ml N.D. N.D. -0.7 N.D. N.D.
stress Gentamicin 0.0016 mg/ml N.D. N.D. -0.7 N.D. N.D.
stress Def Lomefloxacin 0.00004 mM N.D. N.D. -0.6 N.D. N.D.
RCH2 grown on a colony of N2F3 N.D. N.D. -0.6 N.D. N.D.
temperature Glucose defined 30C timecourse1 timepoint 3 N.D. N.D. -0.6 N.D. N.D.
stress nitrate 250 mM N.D. N.D. -0.6 N.D. N.D.
stress sodium fluoride 8.5 mM N.D. N.D. +0.6 N.D. N.D.
carbon source propionate (C) N.D. N.D. +0.6 N.D. N.D.
carbon source propionate (C) N.D. N.D. +0.7 N.D. N.D.
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