Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0090 and Psest_0091 overlap by 11 nucleotidesPsest_0091 and Psest_0092 are separated by 11 nucleotidesPsest_0092 and Psest_0093 overlap by 4 nucleotidesPsest_0093 and Psest_0094 overlap by 4 nucleotides Psest_0090: Psest_0090 - phosphonate metabolism protein PhnM, at 90,952 to 92,097 _0090 Psest_0091: Psest_0091 - phosphonate C-P lyase system protein PhnL, at 92,087 to 92,791 _0091 Psest_0092: Psest_0092 - phosphonate C-P lyase system protein PhnK, at 92,803 to 93,615 _0092 Psest_0093: Psest_0093 - Uncharacterized enzyme of phosphonate metabolism, at 93,612 to 94,481 _0093 Psest_0094: Psest_0094 - Uncharacterized enzyme of phosphonate metabolism, at 94,478 to 95,587 _0094
Group Condition Psest_0090 Psest_0091 Psest_0092 Psest_0093 Psest_0094
temperature LB 30C timecourse1 timepoint 1 +0.1 -0.7 N.D. -1.7 -1.9
RCH2 grown on a colony of N2C3 -0.2 -0.0 N.D. -2.3 -0.8
stress L-Lysine 200 mM +0.1 -0.5 N.D. -1.9 -0.9
stress Def A22 0.015 mg/ml -0.5 -0.6 N.D. -0.0 -2.0
nitrogen source L-Alanine (N) -0.7 -0.2 N.D. -0.9 -1.3
nitrogen source L-Isoleucine (N) +0.1 -0.5 N.D. -0.4 -2.2
stress 5-Hydroxymethylfurfural 5 mM -0.2 -0.5 N.D. -1.5 -0.6
stress Def Vancomycin 0.016 mg/ml -0.3 -0.5 N.D. -1.0 -0.9
temperature LB 30C timecourse2 timepoint 1 -0.1 -0.3 N.D. -1.0 -1.3
stress Def Cephalothin 0.08 mg/ml -0.2 -0.6 N.D. -0.7 -1.0
RCH2 grown on a colony of Serratia +0.2 -0.2 N.D. -1.8 -0.6
nitrogen source L-Arginine (N) -0.6 -0.1 N.D. -0.9 -0.8
nitrogen source Putrescine (N) -0.4 +0.2 N.D. -0.1 -1.8
nitrogen source nitrite (N) +0.0 -1.0 N.D. +0.5 -1.4
lb LB +0.2 -0.3 N.D. +0.6 -2.2
RCH2 grown on a colony of 8R2A +0.1 +0.6 N.D. -0.6 -1.6
stress Vanillin 2 mM -0.1 -0.5 N.D. +0.8 -1.5
stress Def Carbenicillin 0.02 mg/ml -0.4 -0.1 N.D. -1.3 +0.6
stress Doxycycline hyclate 0.0002 mg/ml -0.2 -0.9 N.D. +0.7 -0.7
stress A22 0.005 mg/ml -0.1 -0.3 N.D. +1.0 -1.3
carbon source butyrate (C) -0.0 +0.4 N.D. +1.2 -1.2
stress Def Polymyxin B sulfate 0.00008 mg/ml +0.6 +0.8 N.D. +0.1 +0.8
stress Def Thallium(I) acetate 0.125 mg/ml +0.3 +0.6 N.D. +0.7 +0.8
stress Fusidic 0.016 mg/ml +0.6 +0.3 N.D. +0.2 +1.5
stress nitrate 250 mM +0.6 +0.5 N.D. +0.0 +1.5
stress Def Phosphomycin 0.125 mg/ml -0.9 +0.8 N.D. +1.1 +2.0
stress Def Chlorate 40 mM +0.5 +1.1 N.D. +0.8 +1.1
stress Chlorate 75 mM +0.9 +1.0 N.D. +1.2 +0.9
stress Phosphomycin 0.012 mg/ml -0.3 +2.8 N.D. +3.4 +3.2
stress Phosphomycin 0.012 mg/ml -0.5 +2.9 N.D. +2.7 +4.3
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