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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psest_0090 and Psest_0091 overlap by 11 nucleotides
Psest_0091 and Psest_0092 are separated by 11 nucleotides
Psest_0092 and Psest_0093 overlap by 4 nucleotides
Psest_0093 and Psest_0094 overlap by 4 nucleotides
Psest_0090: Psest_0090 - phosphonate metabolism protein PhnM, at 90,952 to 92,097
_0090
Psest_0091: Psest_0091 - phosphonate C-P lyase system protein PhnL, at 92,087 to 92,791
_0091
Psest_0092: Psest_0092 - phosphonate C-P lyase system protein PhnK, at 92,803 to 93,615
_0092
Psest_0093: Psest_0093 - Uncharacterized enzyme of phosphonate metabolism, at 93,612 to 94,481
_0093
Psest_0094: Psest_0094 - Uncharacterized enzyme of phosphonate metabolism, at 94,478 to 95,587
_0094
Group
Condition
Psest
_0090
Psest
_0091
Psest
_0092
Psest
_0093
Psest
_0094
temperature
LB 30C timecourse1 timepoint 1
+0.1
-0.7
N.D.
-1.7
-1.9
RCH2 grown on a colony of N2C3
-0.2
-0.0
N.D.
-2.3
-0.8
stress
L-Lysine 200 mM
+0.1
-0.5
N.D.
-1.9
-0.9
stress
Def A22 0.015 mg/ml
-0.5
-0.6
N.D.
-0.0
-2.0
nitrogen source
L-Alanine (N)
-0.7
-0.2
N.D.
-0.9
-1.3
nitrogen source
L-Isoleucine (N)
+0.1
-0.5
N.D.
-0.4
-2.2
stress
5-Hydroxymethylfurfural 5 mM
-0.2
-0.5
N.D.
-1.5
-0.6
stress
Def Vancomycin 0.016 mg/ml
-0.3
-0.5
N.D.
-1.0
-0.9
temperature
LB 30C timecourse2 timepoint 1
-0.1
-0.3
N.D.
-1.0
-1.3
stress
Def Cephalothin 0.08 mg/ml
-0.2
-0.6
N.D.
-0.7
-1.0
RCH2 grown on a colony of Serratia
+0.2
-0.2
N.D.
-1.8
-0.6
nitrogen source
L-Arginine (N)
-0.6
-0.1
N.D.
-0.9
-0.8
nitrogen source
Putrescine (N)
-0.4
+0.2
N.D.
-0.1
-1.8
nitrogen source
nitrite (N)
+0.0
-1.0
N.D.
+0.5
-1.4
lb
LB
+0.2
-0.3
N.D.
+0.6
-2.2
RCH2 grown on a colony of 8R2A
+0.1
+0.6
N.D.
-0.6
-1.6
stress
Vanillin 2 mM
-0.1
-0.5
N.D.
+0.8
-1.5
stress
Def Carbenicillin 0.02 mg/ml
-0.4
-0.1
N.D.
-1.3
+0.6
stress
Doxycycline hyclate 0.0002 mg/ml
-0.2
-0.9
N.D.
+0.7
-0.7
stress
A22 0.005 mg/ml
-0.1
-0.3
N.D.
+1.0
-1.3
carbon source
butyrate (C)
-0.0
+0.4
N.D.
+1.2
-1.2
stress
Def Polymyxin B sulfate 0.00008 mg/ml
+0.6
+0.8
N.D.
+0.1
+0.8
stress
Def Thallium(I) acetate 0.125 mg/ml
+0.3
+0.6
N.D.
+0.7
+0.8
stress
Fusidic 0.016 mg/ml
+0.6
+0.3
N.D.
+0.2
+1.5
stress
nitrate 250 mM
+0.6
+0.5
N.D.
+0.0
+1.5
stress
Def Phosphomycin 0.125 mg/ml
-0.9
+0.8
N.D.
+1.1
+2.0
stress
Def Chlorate 40 mM
+0.5
+1.1
N.D.
+0.8
+1.1
stress
Chlorate 75 mM
+0.9
+1.0
N.D.
+1.2
+0.9
stress
Phosphomycin 0.012 mg/ml
-0.3
+2.8
N.D.
+3.4
+3.2
stress
Phosphomycin 0.012 mg/ml
-0.5
+2.9
N.D.
+2.7
+4.3
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