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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psest_0086 and Psest_0087 are separated by 71 nucleotides
Psest_0087 and Psest_0088 are separated by 273 nucleotides
Psest_0088 and Psest_0089 overlap by 10 nucleotides
Psest_0089 and Psest_0090 are separated by 98 nucleotides
Psest_0086: Psest_0086 - hypothetical protein, at 88,546 to 88,971
_0086
Psest_0087: Psest_0087 - hypothetical protein, at 89,043 to 89,285
_0087
Psest_0088: Psest_0088 - phosphonate metabolism protein PhnP, at 89,559 to 90,308
_0088
Psest_0089: Psest_0089 - phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN, at 90,299 to 90,853
_0089
Psest_0090: Psest_0090 - phosphonate metabolism protein PhnM, at 90,952 to 92,097
_0090
Group
Condition
Psest
_0086
Psest
_0087
Psest
_0088
Psest
_0089
Psest
_0090
RCH2 grown on a colony of N2F3
-0.6
-0.6
-0.0
-1.3
-0.3
stress
Cobalt chloride 0.08 mM
-1.6
-0.2
-0.9
+0.1
+0.0
stress
Def Cephalothin 0.08 mg/ml
-0.2
-0.5
+0.1
-1.6
-0.2
RCH2 grown on a colony of N2F3
-1.1
+0.2
-1.0
-0.2
+0.1
stress
D-Cycloserine 0.032 mg/ml
-1.5
-0.3
-0.7
+0.5
+0.1
nitrogen source
L-Alanine (N)
+0.3
-0.8
-0.1
-0.6
-0.7
RCH2 grown on a colony of Serratia
-1.5
+0.2
-0.4
-0.5
+0.4
stress
methylglyoxal 0.0016 vol%
-0.4
-0.4
-0.8
+0.4
-0.4
stress
Nalidixic 0.00390625 mg/ml
-1.8
-0.1
+0.4
-0.3
+0.3
stress
Def 2-Furfuraldehyde 0.032 vol%
-1.7
+0.0
-1.2
+0.8
+0.6
stress
syringaldehyde 4 mM
-0.7
-0.8
+0.6
-0.4
-0.2
carbon source
propionate (C)
+0.7
-1.4
-0.3
-0.4
+0.1
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
+0.3
-1.4
-0.3
+0.3
+0.1
nitrogen source
L-Glutamic (N)
-1.0
+0.9
+0.3
+0.1
-0.2
stress
Def Neomycin 0.0008 mg/ml
-0.8
-0.8
+0.5
+1.0
+0.4
RCH2 grown on a colony of ecoli
+0.8
+0.7
-0.6
-0.5
+0.1
stress
Benzethonium chloride 0.01 mM
-0.1
+1.2
-0.4
+0.3
-0.4
stress
Def Benzalkonium Chloride 0.002 mg/ml
-1.1
+0.4
+0.2
+0.5
+0.4
stress
Cephalothin 0.04 mg/ml
-1.3
+0.8
-0.0
+0.8
+0.5
stress
Def sodium fluoride 25 mM
-0.8
+0.5
-0.4
+1.3
+0.3
temperature
LB 30C timecourse2 timepoint 2
-0.3
+0.4
-0.4
+1.2
+0.3
RCH2 grown on a colony of Serratia
+1.2
+0.9
-0.2
-0.1
+0.2
stress
Def Chlorate 20 mM
-0.3
+0.5
-0.1
+1.9
+0.5
stress
nitrate 250 mM
+0.2
+0.2
+0.2
+1.5
+0.6
stress
Chlorate 75 mM
+0.2
+0.2
+0.1
+1.3
+0.9
stress
Benzalkonium Chloride 0.002 mg/ml
+0.7
+0.8
+0.4
+0.6
+0.4
radiation
Ionizing radiation, 319.06 Gy,
+1.0
+0.7
+0.6
+0.6
+0.1
stress
Def Chlorate 40 mM
-0.5
+0.6
+0.0
+2.3
+0.5
stress
Def Chloride 400 mM
-0.2
+0.5
+0.1
+2.2
+0.5
stress
Polymyxin B sulfate 0.0001 mg/ml
+1.8
-0.1
+0.3
+0.8
+0.4
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