Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0874 and Psest_0876 are separated by 1336 nucleotidesPsest_0876 and Psest_0877 are separated by 40 nucleotidesPsest_0877 and Psest_0879 are separated by 816 nucleotidesPsest_0879 and Psest_0880 are separated by 137 nucleotides Psest_0874: Psest_0874 - Type I restriction-modification system methyltransferase subunit, at 950,286 to 952,262 _0874 Psest_0876: Psest_0876 - Type III restriction enzyme, res subunit./Type I restriction enzyme R protein N terminus (HSDR_N)., at 953,599 to 956,793 _0876 Psest_0877: Psest_0877 - Restriction endonuclease, at 956,834 to 957,745 _0877 Psest_0879: Psest_0879 - Transcriptional regulator, at 958,562 to 959,458 _0879 Psest_0880: Psest_0880 - NADPH:quinone reductase and related Zn-dependent oxidoreductases, at 959,596 to 960,588 _0880
Group Condition Psest_0874 Psest_0876 Psest_0877 Psest_0879 Psest_0880
stress Def Carbenicillin 0.008 mg/ml -0.1 -0.2 -0.4 -1.0 -1.0
stress Gentamicin 0.0016 mg/ml -0.1 -0.0 -0.4 -0.8 -0.7
carbon source L-Lactate (C) -0.2 -0.2 -0.3 -0.6 -0.5
carbon source RCH2 defined media -0.1 -0.1 -0.2 -0.7 -0.7
carbon source L-Proline (C) -0.2 -0.4 -0.4 -0.4 -0.3
stress nitrate 250 mM -0.1 +0.2 +0.0 -0.8 -1.0
stress Def Polymyxin B sulfate 0.00008 mg/ml -0.1 -0.1 -0.3 -0.6 -0.5
stress Nalidixic 0.001 mg/ml -0.4 -0.2 -0.3 -0.3 -0.3
temperature LB 30C timecourse1 timepoint 3 -0.1 -0.2 -0.4 -0.3 -0.4
stress Def Benzethonium chloride 0.008 mM +0.0 +0.1 -0.1 -0.7 -0.6
stress Cephalothin 0.04 mg/ml +0.2 +0.2 -0.3 -0.9 -0.4
stress Doxycycline hyclate 0.0002 mg/ml +0.0 -0.2 -0.6 -0.3 -0.1
stress Benzethonium chloride 0.0125 mM -0.2 -0.1 -0.3 -0.3 -0.2
stress Def Benzalkonium Chloride 0.002 mg/ml -0.1 +0.1 -0.1 -0.5 -0.5
stress Lactate-nitrate; anaerobic; copper stress sample1 -0.1 -0.0 -0.3 -0.4 -0.3
stress Def methylglyoxal 0.01 vol% -0.1 -0.1 -0.1 -0.3 -0.4
stress Carbenicillin 0.008 mg/ml +0.1 -0.1 -1.0 +0.1 -0.0
stress Def Carbenicillin 0.02 mg/ml -0.1 -0.3 +0.3 -0.4 -0.3
stress Fusidic 0.016 mg/ml +0.1 +0.3 -0.0 -0.7 -0.3
stress Choline chloride 90 mM +0.1 +0.1 -0.8 -0.1 -0.1
stress A22 0.005 mg/ml -0.0 -0.1 -0.5 -0.2 +0.2
stress Lactate-nitrate; anaerobic; copper stress sample3 -0.1 -0.1 +0.5 -0.4 -0.4
stress Lactate-nitrate; anaerobic sample3 -0.1 +0.0 +0.5 -0.3 -0.2
stress Def 2-Furfuraldehyde 0.032 vol% -0.0 +0.3 +0.5 -0.4 -0.2
RCH2 grown on a colony of N2A2 +0.1 +0.1 +0.7 -0.1 -0.2
stress Cisplatin 0.003 mg/ml +0.1 -0.0 +0.5 -0.2 +0.3
stress Paraquat dichloride 0.015 mg/ml +0.0 +0.1 +1.0 -0.4 +0.1
stress nitrate 200 mM -0.1 -0.0 +0.5 +0.2 +0.3
nitrogen source L-Isoleucine (N) +0.3 +0.1 +0.2 +0.2 +0.3
carbon source propionate (C) +0.0 +0.2 +1.0 +0.2 -0.2
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