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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_0868 and Psest_0869 are separated by 174 nucleotides
Psest_0869 and Psest_0870 are separated by 150 nucleotides
Psest_0870 and Psest_0871 are separated by 81 nucleotides
Psest_0871 and Psest_0872 are separated by 174 nucleotides
Psest_0868: Psest_0868 - Glutathione S-transferase, at 944,030 to 944,653
_0868
Psest_0869: Psest_0869 - Acetyltransferase (isoleucine patch superfamily), at 944,828 to 945,376
_0869
Psest_0870: Psest_0870 - Alpha-glucosidase (EC 3.2.1.20)
(from data)
, at 945,527 to 947,155
_0870
Psest_0871: Psest_0871 - maltose ABC transporter, ATPase component MalK
(from data)
, at 947,237 to 948,352
_0871
Psest_0872: Psest_0872 - Helix-turn-helix., at 948,527 to 948,844
_0872
Group
Condition
Psest
_0868
Psest
_0869
Psest
_0870
Psest
_0871
Psest
_0872
carbon source
D-Maltose (C)
-2.1
-2.2
-4.9
-6.3
-0.3
carbon source
D-Maltose (C)
-2.2
-1.7
-5.1
-6.3
+0.1
carbon source
D-Maltose (C)
-1.8
-2.0
-5.5
-4.9
+0.1
stress
Thallium(I) acetate 0.08 mg/ml
-0.1
-0.7
-0.5
-0.2
-3.2
stress
Nickel (II) chloride 0.9 mM
-0.1
-0.9
-0.1
+0.1
-3.0
RCH2 grown on a colony of 8R2A
-0.2
-1.7
+0.2
-0.1
-2.0
RCH2 grown on a colony of ecoli
-0.3
-0.8
+0.3
+0.0
-2.9
stress
perchlorate 25 mM
-0.2
+0.2
+0.1
-0.3
-3.0
stress
Choline Lysine 20 mM
-0.1
+0.1
-0.5
-0.1
-2.5
stress
A22 0.002 mg/ml
-0.5
-1.3
-0.2
+0.1
-1.0
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
+0.1
-1.1
-0.1
-0.3
-1.5
stress
Def Chlorate 20 mM
-1.0
-0.5
+0.1
+0.2
-1.5
lb
LB
-0.1
-0.9
-0.3
+0.0
-1.4
stress
syringaldehyde 3 mM
-0.6
-0.1
+0.1
-0.2
-1.8
stress
Spectinomycin 0.00625 mg/ml
+0.3
-1.3
-0.1
+0.2
-1.5
stress
perchlorate 12.5 mM
-0.2
+0.1
-0.1
-0.0
-2.3
stress
sodium fluoride 8.5 mM
+0.3
-0.7
+0.2
+0.0
-2.4
stress
Thallium(I) acetate 0.1 mg/ml
-0.2
-0.4
+0.3
-0.3
-1.6
vitamin
No vitamins t2
-0.8
+0.5
-0.8
-0.3
-0.8
stress
Doxycycline hyclate 0.0002 mg/ml
-0.1
+0.1
-0.2
+0.3
-2.0
temperature
Glucose defined 30C timecourse1 timepoint 3
+0.4
+0.1
-1.7
-0.1
-0.5
nitrogen source
L-Isoleucine (N)
-0.9
+0.5
+0.1
+0.0
-1.2
RCH2 grown on a colony of ecoli
-0.5
-1.0
-0.2
+0.6
-0.4
stress
Chlorate 75 mM
+0.8
-1.1
+0.3
+0.2
-1.5
stress
Choline chloride 90 mM
-0.2
+0.6
-1.4
+0.4
-0.6
vitamin
With vitamins t2
-0.1
+1.6
-1.2
+0.1
-0.2
radiation
Ionizing radiation, 0 Gy
+0.1
+1.1
+0.1
-0.4
+1.0
nutrient
Min media with glucose
+0.4
+0.9
-0.9
+0.1
+1.7
stress
2-Furfuraldehyde 0.05 vol%
+0.2
+0.7
+0.0
-0.1
+2.0
stress
D-Cycloserine 0.032 mg/ml
+0.3
+0.1
+0.5
+0.7
+1.7
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