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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psest_0856 and Psest_0857 are separated by 275 nucleotides
Psest_0857 and Psest_0858 are separated by 251 nucleotides
Psest_0858 and Psest_0859 are separated by 122 nucleotides
Psest_0859 and Psest_0860 are separated by 387 nucleotides
Psest_0856: Psest_0856 - Predicted oxidoreductase, at 927,168 to 928,031
_0856
Psest_0857: Psest_0857 - Membrane transporters of cations and cationic drugs, at 928,307 to 928,627
_0857
Psest_0858: Psest_0858 - Maltose operon periplasmic protein precursor (MalM)., at 928,879 to 929,802
_0858
Psest_0859: Psest_0859 - Maltoporin (phage lambda and maltose receptor), at 929,925 to 931,217
_0859
Psest_0860: Psest_0860 - Glycosidases, at 931,605 to 933,251
_0860
Group
Condition
Psest
_0856
Psest
_0857
Psest
_0858
Psest
_0859
Psest
_0860
RCH2 grown on a colony of N2C3
+0.2
-2.3
-0.9
-0.6
-0.2
lb
LB
-0.6
-2.5
+0.2
-0.1
-0.7
stress
Def Carbenicillin 0.008 mg/ml
-0.2
-2.3
-0.5
-0.1
-0.2
stress
Carbenicillin 0.008 mg/ml
-0.4
-1.5
-0.6
-0.1
-0.4
stress
Furfuryl Alcohol 0.05 vol%
-1.2
+0.6
-1.3
-0.7
-0.3
carbon source
L-tyrosine (C)
-0.3
-1.8
-0.1
+0.1
-0.2
nitrogen source
nitrite (N)
-0.2
-1.0
-0.4
-0.1
-0.4
stress
Cobalt chloride 0.05 mM
-0.1
-2.1
-0.1
+0.0
+0.1
temperature
LB 30C timecourse2 timepoint 2
-0.1
-2.0
+0.3
-0.3
-0.2
stress
Bacitracin 0.25 mg/ml
+0.3
-1.8
+0.1
-0.0
-0.2
stress
perchlorate 12.5 mM
-0.4
-0.9
+0.3
+0.2
-0.6
stress
Cephalothin 0.04 mg/ml
+0.5
-1.8
+0.0
+0.4
-0.1
stress
Nickel (II) chloride 0.9 mM
-0.4
-1.3
+0.5
+0.3
+0.2
stress
nitrate 200 mM
-0.8
+0.7
-0.4
+0.2
-0.2
stress
Def Chloride 400 mM
-0.3
-1.2
+0.5
+0.4
+0.3
stress
Paraquat dichloride 0.015 mg/ml
+0.2
+1.1
-0.2
-0.2
-0.4
stress
Nalidixic 0.00390625 mg/ml
-0.3
+1.5
-0.4
-0.2
-0.0
stress
Fusidic 0.016 mg/ml
+1.1
-0.3
+0.6
+0.2
-0.4
stress
nitrate 200 mM
-0.3
+1.4
+0.3
+0.5
-0.2
stress
Doxycycline hyclate 0.0002 mg/ml
+0.0
+1.6
+0.0
+0.4
-0.2
RCH2 grown on a colony of Serratia
+0.9
+1.1
+0.1
-0.0
-0.3
stress
Lactate-nitrate; anaerobic; dichromate stress sample1
-0.1
+1.2
+0.4
+0.2
+0.2
stress
Lactate-nitrate; anaerobic; nickel stress sample3
-0.3
+2.1
-0.1
+0.3
+0.0
stress
Chlorate 75 mM
+1.0
-0.5
+0.7
+0.4
+0.5
stress
Def Thallium(I) acetate 0.125 mg/ml
+0.7
+0.6
+0.4
+0.4
+0.2
stress
Def Nalidixic 0.001 mg/ml
+0.4
+0.9
+0.3
+0.4
+0.2
nitrogen source
Putrescine (N)
+0.4
+1.7
+0.3
+0.0
+0.1
stress
Nalidixic 0.001 mg/ml
+0.4
+1.8
+0.1
+0.0
+0.2
carbon source
RCH2 defined media
+0.5
+1.5
+0.5
+0.3
+0.0
RCH2 grown on a colony of Serratia
+0.6
+3.0
-0.3
+0.1
-0.5
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