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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_0840 and Psest_0841 are separated by 74 nucleotides
Psest_0841 and Psest_0842 overlap by 4 nucleotides
Psest_0842 and Psest_0843 are separated by 49 nucleotides
Psest_0843 and Psest_0844 overlap by 4 nucleotides
Psest_0840: Psest_0840 - anaerobic ribonucleoside-triphosphate reductase, at 910,238 to 912,256
_0840
Psest_0841: Psest_0841 - hypothetical protein, at 912,331 to 912,486
_0841
Psest_0842: Psest_0842 - anaerobic ribonucleoside-triphosphate reductase activating protein, at 912,483 to 913,178
_0842
Psest_0843: Psest_0843 - hypothetical protein, at 913,228 to 914,604
_0843
Psest_0844: Psest_0844 - High-affinity Fe2+/Pb2+ permease, at 914,601 to 915,458
_0844
Group
Condition
Psest
_0840
Psest
_0841
Psest
_0842
Psest
_0843
Psest
_0844
stress
nitrate 200 mM
+0.0
N.D.
-0.3
-3.4
-5.0
stress
nitrate 250 mM
-0.3
N.D.
+0.3
-3.6
-3.8
carbon source
Glycolic Acid (C)
-0.0
N.D.
-0.4
-2.8
-4.1
stress
nitrate 200 mM
-0.1
N.D.
-0.8
-3.5
-3.0
temperature
LB 30C timecourse1 timepoint 3
-0.0
N.D.
-0.6
-3.2
-3.2
stress
benzoic 0.4 mg/ml
+0.1
N.D.
+0.2
-3.4
-3.7
stress
Paraquat dichloride 0.015 mg/ml
+0.0
N.D.
-2.2
-2.1
-2.1
carbon source
Glycolic Acid (C)
-0.1
N.D.
-0.4
-2.6
-2.6
stress
Nickel (II) chloride 0.9 mM
-0.1
N.D.
-0.4
-2.3
-2.8
stress
Nickel (II) chloride 1 mM
-0.0
N.D.
+0.2
-2.5
-2.9
stress
Nickel (II) chloride 1 mM
-0.1
N.D.
-0.6
-2.4
-2.0
stress
Paraquat dichloride 0.015 mg/ml
-0.0
N.D.
-0.9
-1.7
-2.4
stress
benzoic 0.4 mg/ml
-0.1
N.D.
+0.0
-2.4
-2.4
stress
benzoic 0.4 mg/ml
+0.2
N.D.
-0.1
-2.3
-2.5
anaerobic
nitrate reduction - anaerobic
-1.5
N.D.
-1.7
-0.3
-1.3
stress
Nickel (II) chloride 0.9 mM
+0.0
N.D.
-0.3
-1.7
-2.5
stress
Aluminum chloride 0.3 mM
-0.1
N.D.
-0.9
-1.7
-1.6
stress
Nickel (II) chloride 0.8 mM
-0.0
N.D.
-0.2
-1.8
-2.3
stress
Polymyxin B sulfate 0.0001 mg/ml
-0.4
N.D.
-1.5
-0.9
-1.3
stress
Lactate-nitrate; anaerobic; copper stress sample3
+0.2
N.D.
-1.2
-1.0
-2.0
stress
Choline chloride 90 mM
+0.1
N.D.
-1.0
-1.0
-2.0
stress
Nickel (II) chloride 0.8 mM
+0.1
N.D.
-0.3
-1.7
-1.9
stress
Nickel (II) chloride 0.8 mM
+0.0
N.D.
+0.2
-1.9
-2.1
stress
Phosphomycin 0.012 mg/ml
-0.1
N.D.
-1.1
-1.0
-1.3
stress
Neomycin 0.004 mg/ml
-0.1
N.D.
-1.4
-1.0
-1.0
temperature
LB 30C timecourse1 timepoint 2
+0.1
N.D.
-0.4
-1.6
-1.6
lb
LB
-0.3
N.D.
-0.6
-0.9
-1.5
stress
Neomycin 0.004 mg/ml
-0.0
N.D.
+0.1
-1.5
-1.7
stress
Cephalothin 0.04 mg/ml
+0.1
N.D.
+0.7
-0.7
-2.6
stress
Choline chloride 90 mM
-0.1
N.D.
+1.1
-1.3
-1.4
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