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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psest_0795 and Psest_0796 overlap by 4 nucleotides
Psest_0796 and Psest_0797 are separated by 25 nucleotides
Psest_0797 and Psest_0798 are separated by 45 nucleotides
Psest_0798 and Psest_0799 are separated by 322 nucleotides
Psest_0795: Psest_0795 - ABC-type multidrug transport system, ATPase component, at 870,523 to 871,449
_0795
Psest_0796: Psest_0796 - ABC-type transport system involved in multi-copper enzyme maturation, permease component, at 871,446 to 872,276
_0796
Psest_0797: Psest_0797 - Predicted lipoprotein involved in nitrous oxide reduction, at 872,302 to 872,874
_0797
Psest_0798: Psest_0798 - twin arginine-targeting protein translocase, TatA/E family, at 872,920 to 873,102
_0798
Psest_0799: Psest_0799 - Uncharacterized protein involved in response to NO, at 873,425 to 874,615
_0799
Group
Condition
Psest
_0795
Psest
_0796
Psest
_0797
Psest
_0798
Psest
_0799
anaerobic
Nitrite/ lactate media with Nitrite 20mM
-1.6
-1.7
-2.0
N.D.
-3.1
anaerobic
Nitrite/ lactate media with Nitrite 20mM
-2.2
-1.3
-1.7
N.D.
-3.0
anaerobic
Nitrite/ lactate media with Nitrite 20mM
-2.0
-1.8
-1.8
N.D.
-2.1
anaerobic
Nitrite/ lactate media with Nitrite 20mM
-2.1
-1.7
-1.5
N.D.
-1.6
anaerobic
Nitrite/ lactate media with Nitrite 20mM
-1.3
-1.8
-1.7
N.D.
-1.8
anaerobic
Nitrite/ lactate media with Nitrite 20mM
-1.8
-1.2
-1.4
N.D.
-1.6
metal limitation
Lactate-nitrite with YE; anaerobic; with copper; sample3
-0.9
-1.0
-0.7
N.D.
-2.8
anaerobic
Nitrate/ lactate media with Nitrate 250mM
-1.1
-1.0
-0.3
N.D.
-2.7
metal limitation
Lactate-nitrite with YE; anaerobic; with copper; sample2
-1.1
-1.7
-0.3
N.D.
-1.9
metal limitation
Lactate-nitrite; anaerobic; with copper; sample3
-0.6
-1.2
-0.1
N.D.
-2.9
stress
Lactate-nitrate; anaerobic; dichromate stress sample1
-1.2
-1.1
-0.6
N.D.
-2.1
stress
Lactate-nitrate; anaerobic; cobalt stress sample3
-0.5
-1.2
-0.1
N.D.
-2.8
stress
Lactate-nitrate; anaerobic; cobalt stress sample1
-0.4
-0.8
-0.8
N.D.
-2.7
metal limitation
Lactate-nitrite; anaerobic; sample3
-0.8
-1.2
-0.5
N.D.
-2.0
metal limitation
Lactate-nitrite with YE; anaerobic; with copper; sample1
-0.6
-1.0
-0.4
N.D.
-2.5
metal limitation
Lactate-nitrite; anaerobic; sample2
-0.4
-1.0
-0.8
N.D.
-2.3
stress
Lactate-nitrate; anaerobic; dichromate stress sample3
-1.2
-0.3
-0.9
N.D.
-2.0
metal limitation
Lactate-nitrite; anaerobic; with copper; sample1
-0.8
-1.1
-0.0
N.D.
-2.4
anaerobic
Nitrate/ lactate media with Nitrate 20mM and .05mM Tungsten
-0.8
-1.4
-0.7
N.D.
-1.3
stress
Lactate-nitrate; anaerobic sample3
-0.5
-1.0
-0.1
N.D.
-2.6
metal limitation
Lactate-nitrite; anaerobic; with copper; sample2
-0.6
-1.3
-0.4
N.D.
-1.8
stress
Lactate-nitrate; anaerobic sample1
-0.4
-1.0
-0.2
N.D.
-2.6
stress
Lactate-nitrate; anaerobic; cobalt stress sample2
-0.8
-0.8
-0.3
N.D.
-2.0
stress
Lactate-nitrate; anaerobic; dichromate stress sample2
-0.9
-0.8
-0.8
N.D.
-1.3
metal limitation
Anaerobic, 100 nM, Mo 1 mM W sample1
-1.3
-0.6
-0.9
N.D.
-0.9
stress
Anaerobic 500 uM Zinc chloride sample1
-0.7
-0.3
-0.2
N.D.
-2.6
metal limitation
Lactate-nitrite with YE; anaerobic; sample3
-0.5
-0.8
-0.6
N.D.
-1.8
stress
Lactate-nitrate; anaerobic; uranyl acetate stress sample1
+0.3
-1.4
-0.2
N.D.
-2.0
anaerobic
Nitrate/ lactate media with Nitrate 50mM
+0.2
-0.3
-0.3
N.D.
-2.9
stress
Lactate-nitrate; anaerobic; copper stress sample1
+0.1
-0.7
+0.3
N.D.
-2.7
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