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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_0788 and Psest_0789 are separated by 216 nucleotides
Psest_0789 and Psest_0790 are separated by 68 nucleotides
Psest_0790 and Psest_0791 are separated by 166 nucleotides
Psest_0791 and Psest_0792 are separated by 275 nucleotides
Psest_0788: Psest_0788 - Uncharacterized conserved protein, at 861,745 to 862,164
_0788
Psest_0789: Psest_0789 - hypothetical protein, at 862,381 to 862,734
_0789
Psest_0790: Psest_0790 - Uncharacterized protein conserved in bacteria, at 862,803 to 863,243
_0790
Psest_0791: Psest_0791 - Acyl-CoA dehydrogenases, at 863,410 to 864,660
_0791
Psest_0792: Psest_0792 - Regulator of nitric oxide reductase transcription, at 864,936 to 867,113
_0792
Group
Condition
Psest
_0788
Psest
_0789
Psest
_0790
Psest
_0791
Psest
_0792
carbon source
L-tyrosine (C)
-0.2
-1.4
-2.1
+0.6
-0.4
metal limitation
Lactate-nitrite with YE; anaerobic; with copper; sample3
+0.3
+0.1
-2.8
+0.1
-1.0
anaerobic
Nitrite/ lactate media with Nitrite 20mM
+0.1
-0.4
-1.1
-0.3
-1.3
metal limitation
Lactate-nitrite with YE; anaerobic; with copper; sample2
+0.1
+0.0
-2.2
+0.1
-0.9
metal limitation
Lactate-nitrite; anaerobic; sample2
+0.2
+0.1
-2.5
+0.2
-0.8
metal limitation
Lactate-nitrite; anaerobic; with copper; sample3
+0.2
+0.3
-2.2
+0.3
-0.7
stress
Chlorate 75 mM
+0.4
-1.8
-1.5
+0.6
+0.1
stress
Spectinomycin 0.00625 mg/ml
+0.2
-0.4
-1.2
-0.7
-0.0
metal limitation
Lactate-nitrite; anaerobic; sample3
+0.4
+0.1
-2.2
+0.5
-0.7
metal limitation
Lactate-nitrite with YE; anaerobic; with copper; sample1
+0.4
+0.3
-2.2
+0.4
-0.8
stress
Lactate-nitrate; anaerobic; cobalt stress sample3
+0.2
+0.6
-2.2
-0.0
-0.4
metal limitation
Lactate-nitrite with YE; anaerobic; sample3
+0.2
-0.0
-1.6
+0.2
-0.6
anaerobic
Nitrite/ lactate media with Nitrite 20mM
+0.3
+0.1
-0.5
-0.3
-1.3
stress
Anaerobic 500 uM Zinc chloride sample1
+0.1
+0.1
-2.1
+0.3
-0.1
metal limitation
Lactate-nitrite; anaerobic; with copper; sample1
+0.2
+0.2
-2.0
+0.6
-0.7
metal limitation
Lactate-nitrite with YE; anaerobic; sample2
+0.1
+0.3
-1.8
+0.4
-0.6
metal limitation
Lactate-nitrite; anaerobic; with copper; sample2
+0.3
+0.1
-1.5
+0.3
-0.7
stress
nitrate 250 mM
+0.4
-0.3
-1.1
+0.1
-0.5
stress
Lactate-nitrate; anaerobic; nickel stress sample2
+0.3
-0.5
-1.4
+0.5
-0.3
stress
Gentamicin 0.0016 mg/ml
+0.4
+0.2
-1.8
-0.2
-0.0
stress
Def 2-Furfuraldehyde 0.032 vol%
+0.6
-0.5
-1.0
-0.6
+0.2
RCH2 grown on a colony of Serratia
-0.3
-0.8
+0.8
-0.7
+0.1
metal limitation
Lactate-nitrite with YE; anaerobic; sample1
+0.5
+0.3
-1.2
+0.4
-0.7
stress
Doxycycline hyclate 0.0002 mg/ml
+0.1
-1.5
+1.0
-0.5
+0.1
stress
Def Carbenicillin 0.008 mg/ml
+0.8
+0.6
-2.0
+0.3
-0.1
stress
Nickel (II) chloride 0.75 mM
+0.5
-0.3
+0.6
-0.9
-0.2
stress
Cobalt chloride 0.08 mM
+0.4
+0.4
-1.1
+0.3
-0.2
stress
Lactate-nitrate; anaerobic; nickel stress sample1
+0.3
+0.4
-1.2
+0.6
-0.2
nitrogen source
nitrite (N)
+0.6
+1.0
-1.2
+0.2
-0.3
stress
Nalidixic 0.00390625 mg/ml
+0.3
-0.6
+2.3
-0.0
+0.1
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