Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0784 and Psest_0785 are separated by 108 nucleotidesPsest_0785 and Psest_0786 are separated by 324 nucleotidesPsest_0786 and Psest_0787 are separated by 363 nucleotidesPsest_0787 and Psest_0788 overlap by 17 nucleotides Psest_0784: Psest_0784 - L-serine dehydratase, iron-sulfur-dependent, single chain form, at 856,617 to 857,993 _0784 Psest_0785: Psest_0785 - Thioredoxin reductase, at 858,102 to 859,049 _0785 Psest_0786: Psest_0786 - tripartite ATP-independent periplasmic transporter solute receptor, DctP family, at 859,374 to 860,399 _0786 Psest_0787: Psest_0787 - tripartite ATP-independent periplasmic transporter solute receptor, DctP family, at 860,763 to 861,761 _0787 Psest_0788: Psest_0788 - Uncharacterized conserved protein, at 861,745 to 862,164 _0788
Group Condition Psest_0784 Psest_0785 Psest_0786 Psest_0787 Psest_0788
stress Polymyxin B sulfate 0.0001 mg/ml -0.4 -0.8 -0.5 -0.3 -1.0
anaerobic Nitrate/ lactate media with Nitrate 250mM -0.2 -2.5 -0.1 -0.1 +0.3
stress Def Chlorate 40 mM -0.3 -0.9 -0.4 -0.3 -0.4
stress Def Chlorate 20 mM -0.5 -0.8 -0.2 -0.2 -0.3
stress Def Chloride 400 mM -0.3 -0.8 -0.3 -0.2 -0.2
stress Def 5-Hydroxymethylfurfural 5 mM -0.2 -0.4 -0.1 -0.6 -0.4
stress D-Cycloserine 0.032 mg/ml -0.1 -1.3 -0.1 -0.1 +0.2
stress Chloride 200 mM -0.0 -1.4 -0.1 -0.1 +0.3
stress Lomefloxacin 0.0001 mM -0.3 -1.2 +0.1 +0.1 -0.0
stress nitrate 250 mM -0.2 -1.3 +0.3 -0.5 +0.4
RCH2 grown on a colony of 8R2A -0.3 -0.8 +0.3 -0.3 -0.0
RCH2 grown on a colony of N2C3 +0.4 -1.0 -0.1 -0.4 -0.2
stress Def Benzalkonium Chloride 0.002 mg/ml +0.0 -1.0 +0.1 -0.5 +0.3
RCH2 grown on a colony of ecoli +0.0 -1.1 +0.3 -0.4 +0.4
RCH2 grown on a colony of N2F3 +0.6 -1.3 -0.0 +0.3 +0.0
RCH2 grown on a colony of N2F3 +0.8 -0.7 +0.1 -0.3 -0.1
stress Gentamicin 0.0016 mg/ml +0.1 -0.6 +0.4 -0.1 +0.4
stress Fusidic 0.016 mg/ml +0.1 -0.5 +0.4 -0.2 +0.5
carbon source butyrate (C) +0.3 -0.5 +0.3 -0.0 +0.6
stress Def Carbenicillin 0.008 mg/ml +0.4 -0.9 +0.6 -0.1 +0.8
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 -0.2 +1.2 -0.0 +0.3 -0.3
carbon source RCH2 defined media +0.3 -0.4 +0.5 +0.0 +0.7
stress Def 2-Furfuraldehyde 0.032 vol% -0.0 +0.9 -0.1 -0.2 +0.6
stress Spectinomycin 0.00625 mg/ml +0.1 +1.1 +0.1 -0.2 +0.2
stress Lactate-nitrate; anaerobic; cobalt stress sample3 -0.1 +0.9 +0.2 +0.2 +0.2
stress syringaldehyde 4 mM +0.2 +1.1 -0.1 +0.3 +0.0
temperature Glucose defined 30C timecourse1 timepoint 3 +0.2 +1.0 +0.1 +0.1 +0.2
temperature LB 30C timecourse1 timepoint 1 +0.3 +0.9 +0.2 +0.0 +0.3
nitrogen source nitrite (N) +0.4 +0.6 +0.4 -0.1 +0.6
temperature LB 30C timecourse1 timepoint 2 +0.4 +0.6 +0.3 +0.2 +0.3
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