Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0779 and Psest_0780 overlap by 1 nucleotidesPsest_0780 and Psest_0781 are separated by 227 nucleotidesPsest_0781 and Psest_0782 are separated by 250 nucleotidesPsest_0782 and Psest_0783 are separated by 107 nucleotides Psest_0779: Psest_0779 - tyrosine aminotransferase (EC 2.6.1.57) (from data), at 847,835 to 849,031 _0779 Psest_0780: Psest_0780 - Pterin-4a-carbinolamine dehydratase, at 849,031 to 849,387 _0780 Psest_0781: Psest_0781 - phenylalanine-4-hydroxylase, monomeric form, at 849,615 to 850,400 _0781 Psest_0782: Psest_0782 - Transcriptional regulator of aromatic amino acids metabolism, at 850,651 to 852,210 _0782 Psest_0783: Psest_0783 - PAS domain S-box, at 852,318 to 856,490 _0783
Group Condition Psest_0779 Psest_0780 Psest_0781 Psest_0782 Psest_0783
carbon source L-tyrosine (C) -5.0 N.D. -2.5 -4.8 +0.1
carbon source L-tyrosine (C) -4.8 N.D. -2.3 -4.4 +0.0
RCH2 grown on a colony of ecoli -0.5 N.D. -1.1 -0.8 -0.1
nutrient L-tyrosine -0.6 N.D. -0.5 -1.3 -0.1
RCH2 grown on a colony of ecoli -1.1 N.D. -0.2 -0.7 -0.1
RCH2 grown on a colony of Serratia -0.4 N.D. +0.0 -1.6 +0.0
nutrient L-tyrosine -0.1 N.D. -0.3 -1.5 -0.1
stress Nalidixic 0.00390625 mg/ml -0.8 N.D. +0.2 -0.7 -0.6
stress Def Cephalothin 0.08 mg/ml -1.2 N.D. -0.2 -0.3 -0.0
stress Choline Lysine 20 mM -1.1 N.D. -0.3 -0.1 -0.0
nitrogen source L-Glutamic (N) -1.1 N.D. -0.4 -0.3 +0.1
lb LB -0.7 N.D. -0.1 -0.6 -0.2
stress 2-Furfuraldehyde 0.05 vol% +0.0 N.D. -0.2 -1.1 -0.2
stress Nickel (II) chloride 0.8 mM -1.1 N.D. +0.0 -0.4 +0.1
stress A22 0.005 mg/ml -0.9 N.D. -0.0 -0.5 +0.1
stress Vanillin 2 mM -0.9 N.D. -0.4 -0.1 +0.2
stress methylglyoxal 0.0016 vol% -1.1 N.D. -0.2 +0.2 +0.1
RCH2 grown on a colony of N2F3 -0.9 N.D. -0.2 +0.3 +0.2
stress Carbenicillin 0.008 mg/ml +0.7 N.D. -0.1 -0.7 -0.4
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 +0.6 N.D. -0.3 -0.4 +0.2
stress Zinc 0.12 mM +0.8 N.D. +0.2 -0.8 -0.1
nitrogen source nitrite (N) +1.0 N.D. +0.6 -1.3 -0.1
stress perchlorate 12.5 mM +0.9 N.D. +0.3 -0.4 -0.0
stress syringaldehyde 3 mM +0.6 N.D. -0.2 +0.6 +0.0
stress Furfuryl Alcohol 0.05 vol% +2.1 N.D. -0.1 -0.8 +0.0
stress Def Benzethonium chloride 0.008 mM +0.9 N.D. +0.3 +0.2 -0.1
stress Cephalothin 0.04 mg/ml +1.0 N.D. -0.2 +0.4 +0.1
stress Def Carbenicillin 0.008 mg/ml +1.3 N.D. +0.2 +0.1 -0.1
stress Def Benzalkonium Chloride 0.002 mg/ml +1.3 N.D. +0.1 -0.0 +0.1
carbon source RCH2 defined media +1.1 N.D. +0.3 +0.1 -0.0
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