Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0770 and Psest_0771 are separated by 118 nucleotidesPsest_0771 and Psest_0772 are separated by 339 nucleotidesPsest_0772 and Psest_0773 overlap by 7 nucleotidesPsest_0773 and Psest_0774 are separated by 13 nucleotides Psest_0770: Psest_0770 - alkylphosphonate utilization operon protein PhnA, at 839,379 to 839,723 _0770 Psest_0771: Psest_0771 - Acyl-CoA hydrolase, at 839,842 to 840,345 _0771 Psest_0772: Psest_0772 - Cytochrome c553, at 840,685 to 841,371 _0772 Psest_0773: Psest_0773 - Cytosine deaminase and related metal-dependent hydrolases, at 841,365 to 842,600 _0773 Psest_0774: Psest_0774 - cytosine permease (from data), at 842,614 to 843,891 _0774
Group Condition Psest_0770 Psest_0771 Psest_0772 Psest_0773 Psest_0774
nitrogen source Cytosine (N) +0.2 -0.5 -0.4 -4.2 -3.6
nitrogen source Cytosine (N) +0.0 -0.1 -0.4 -3.4 -3.4
nitrogen source Cytosine (N) +0.4 -0.5 -0.3 -3.5 -3.3
carbon source L-Proline (C) -0.1 -2.3 -0.3 -0.1 -0.1
stress Def 2-Furfuraldehyde 0.032 vol% +0.5 -2.3 -0.9 -0.1 +0.0
stress Chlorate 75 mM -0.3 -1.4 -0.3 -0.5 -0.1
carbon source L-Proline (C) +0.1 -2.2 -0.1 +0.2 +0.0
stress Def Benzalkonium Chloride 0.002 mg/ml +0.5 +0.6 -1.0 +0.1 -0.4
RCH2 grown on a colony of Serratia +0.7 -1.3 +0.2 +0.1 +0.2
stress nitrate 250 mM +0.5 +0.8 -0.8 -0.4 -0.1
stress L-Lysine 200 mM -0.3 -0.8 +0.4 +0.6 +0.3
RCH2 grown on a colony of N2F3 +0.6 -0.6 +0.3 +0.7 -0.4
stress D-Cycloserine 0.032 mg/ml -0.9 +1.7 +0.0 +0.1 -0.3
stress Dimethyl Sulfoxide 5 vol% +0.4 +0.4 +0.8 -0.5 -0.3
RCH2 grown on a colony of Serratia +1.1 +0.2 -0.7 +0.3 +0.1
stress Choline chloride 90 mM -1.1 +2.5 -0.5 +0.1 +0.0
carbon source butyrate (C) +0.2 +1.4 -0.7 +0.2 -0.0
stress Cephalothin 0.04 mg/ml +1.3 +0.8 -0.8 -0.1 +0.0
stress Cobalt chloride 0.05 mM +0.5 +1.2 -0.5 +0.3 -0.2
stress D-Cycloserine 0.032 mg/ml +0.0 +1.8 -0.2 +0.3 -0.4
stress Def Carbenicillin 0.008 mg/ml +1.3 +1.3 -0.8 -0.1 -0.2
stress nitrate 200 mM +0.6 +1.2 -0.5 -0.0 +0.2
stress 1-ethyl-3-methylimidazolium acetate 40 mM -0.3 +1.1 +0.3 +0.6 +0.2
stress Paraquat dichloride 0.015 mg/ml +0.4 +1.5 +0.3 -0.4 +0.2
stress Gentamicin 0.0016 mg/ml +0.8 +1.9 -0.7 +0.4 -0.1
stress Furfuryl Alcohol 0.05 vol% +0.6 +1.6 +0.0 +0.4 -0.2
stress Choline chloride 90 mM -0.2 +2.7 -0.5 +0.3 +0.1
carbon source L-tyrosine (C) -0.6 +3.9 +0.0 -0.4 -0.3
stress Choline Lysine 20 mM +0.0 +1.7 +0.6 +0.5 +0.1
carbon source L-tyrosine (C) -0.5 +4.2 -0.4 +0.3 +0.4
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