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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psest_0760 and Psest_0761 are separated by 25 nucleotides
Psest_0761 and Psest_0762 overlap by 1 nucleotides
Psest_0762 and Psest_0763 overlap by 4 nucleotides
Psest_0763 and Psest_0764 are separated by 241 nucleotides
Psest_0760: Psest_0760 - Polyketide cyclase / dehydrase and lipid transport., at 829,773 to 830,168
_0760
Psest_0761: Psest_0761 - Predicted permease, DMT superfamily, at 830,194 to 831,318
_0761
Psest_0762: Psest_0762 - Glucose/sorbosone dehydrogenases, at 831,318 to 832,616
_0762
Psest_0763: Psest_0763 - Predicted membrane protein, at 832,613 to 833,062
_0763
Psest_0764: Psest_0764 - diguanylate cyclase (GGDEF) domain, at 833,304 to 834,860
_0764
Group
Condition
Psest
_0760
Psest
_0761
Psest
_0762
Psest
_0763
Psest
_0764
RCH2 grown on a colony of ecoli
-1.7
+0.2
-0.2
-0.4
-0.1
stress
Cobalt chloride 0.07 mM
-1.2
+0.1
-0.3
-0.5
+0.0
stress
Def Neomycin 0.0008 mg/ml
-0.6
-0.3
-0.3
-0.2
-0.1
carbon source
L-tyrosine (C)
-1.0
-0.0
-0.4
-0.2
+0.2
stress
Carbenicillin 0.008 mg/ml
-0.7
+0.0
-0.6
-0.2
-0.0
stress
Def A22 0.015 mg/ml
-0.5
-0.2
-0.2
-0.3
-0.3
stress
Chlorite 0.06 mM
-0.5
-0.1
-0.3
-0.2
-0.2
stress
Furfuryl Alcohol 0.2 vol%
-0.5
+0.1
-0.2
-0.6
-0.1
carbon source
propionate (C)
-1.2
+0.1
-0.1
-0.0
+0.0
anaerobic
Nitrate/ lactate media with Nitrate 250mM
-1.2
-0.1
+0.1
+0.1
-0.1
carbon source
L-tyrosine (C)
-0.3
+0.1
+0.1
-1.0
+0.1
RCH2 grown on a colony of N2A2
-1.1
+0.2
-0.0
+0.1
+0.0
stress
Benzethonium chloride 0.0125 mM
-0.5
+0.3
+0.3
-0.1
-0.3
RCH2 grown on a colony of Serratia
+0.7
+0.4
+0.1
-1.1
-0.1
RCH2 grown on a colony of Serratia
+1.2
+0.3
-1.1
-0.3
-0.0
stress
L-Lysine 200 mM
-0.7
+0.1
+0.4
+0.1
+0.1
radiation
Ionizing radiation, 319.06 Gy,
+0.8
+0.1
-0.3
-0.4
-0.1
stress
A22 0.002 mg/ml
+0.9
-0.2
-0.3
+0.0
-0.1
stress
Nalidixic 0.00390625 mg/ml
+1.2
-0.2
-0.7
+0.1
+0.1
stress
Nalidixic 0.00390625 mg/ml
+0.4
-0.3
+0.2
+0.5
-0.1
stress
Choline chloride 90 mM
+0.8
+0.1
-0.4
-0.0
+0.2
stress
Lomefloxacin 0.0001 mM
+0.7
-0.1
-0.1
+0.5
-0.0
stress
Def Carbenicillin 0.008 mg/ml
+0.6
-0.2
+0.8
-0.1
-0.1
stress
nitrate 250 mM
+0.6
-0.1
+0.4
+0.2
-0.0
stress
Spectinomycin 0.00625 mg/ml
+0.5
+0.2
+0.1
+0.6
+0.1
temperature
LB 30C timecourse2 timepoint 2
+0.5
+0.2
+0.3
+0.3
+0.3
nitrogen source
L-Isoleucine (N)
+0.6
+0.2
+0.4
+0.2
+0.2
nitrogen source
nitrite (N)
+0.6
+0.0
+0.7
+0.4
+0.1
stress
Chlorate 75 mM
+1.1
-0.1
+0.7
+0.1
+0.1
stress
Cephalothin 0.04 mg/ml
+1.0
+0.1
+0.9
-0.2
+0.3
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