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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_0757 and Psest_0758 are separated by 114 nucleotides
Psest_0758 and Psest_0759 are separated by 60 nucleotides
Psest_0759 and Psest_0760 are separated by 294 nucleotides
Psest_0760 and Psest_0761 are separated by 25 nucleotides
Psest_0757: Psest_0757 - hypothetical protein, at 827,694 to 828,167
_0757
Psest_0758: Psest_0758 - Lactoylglutathione lyase and related lyases, at 828,282 to 828,671
_0758
Psest_0759: Psest_0759 - Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)., at 828,732 to 829,478
_0759
Psest_0760: Psest_0760 - Polyketide cyclase / dehydrase and lipid transport., at 829,773 to 830,168
_0760
Psest_0761: Psest_0761 - Predicted permease, DMT superfamily, at 830,194 to 831,318
_0761
Group
Condition
Psest
_0757
Psest
_0758
Psest
_0759
Psest
_0760
Psest
_0761
stress
D-Cycloserine 0.032 mg/ml
-0.6
+0.1
-3.7
-0.3
-0.0
RCH2 grown on a colony of N2F3
+0.2
-0.4
-2.7
+0.1
+0.2
stress
D-Cycloserine 0.032 mg/ml
-0.6
-0.1
-1.5
-0.4
+0.1
stress
5-Hydroxymethylfurfural 5 mM
-0.5
+0.1
-1.4
-0.2
-0.2
carbon source
butyrate (C)
+0.1
-0.1
-2.3
+0.3
+0.0
nitrogen source
L-Citrulline (N)
-0.1
+0.4
-1.6
-0.3
-0.1
RCH2 grown on a colony of ecoli
+0.6
-0.1
-0.7
-1.7
+0.2
stress
A22 0.005 mg/ml
-0.4
+0.0
-1.7
+0.4
-0.1
temperature
LB 30C timecourse2 timepoint 2
-0.6
+0.2
-1.5
+0.5
+0.2
stress
Nalidixic 0.00390625 mg/ml
-0.0
-0.7
-1.1
+1.2
-0.2
stress
1-ethyl-3-methylimidazolium acetate 20 mM
+0.7
-0.1
-1.7
+0.4
+0.1
RCH2 grown on a colony of N2C3
-1.3
+0.3
+1.1
-0.7
+0.0
stress
Chlorate 75 mM
+0.5
-0.4
-1.7
+1.1
-0.1
stress
nitrate 200 mM
+0.9
-0.1
-1.1
-0.3
+0.1
carbon source
propionate (C)
+1.1
-0.2
+0.0
-1.2
+0.1
stress
Cobalt chloride 0.07 mM
-0.4
+0.2
+1.1
-1.2
+0.1
carbon source
L-tyrosine (C)
-0.3
-0.1
+2.2
-1.0
-0.0
stress
syringaldehyde 4 mM
-0.6
-0.2
+1.2
+0.5
-0.1
nitrogen source
L-Glutamic (N)
-0.9
-0.1
+1.7
-0.1
+0.2
temperature
LB 30C timecourse1 timepoint 3
-0.6
+0.3
+1.1
+0.6
-0.2
stress
Nickel (II) chloride 1 mM
+1.1
-0.6
+0.9
+0.1
-0.1
carbon source
D-Gluconic Acid (C)
-0.7
-0.0
+1.8
+0.3
+0.1
stress
Def Cephalothin 0.08 mg/ml
-0.5
+0.4
+0.7
+0.7
+0.2
stress
Carbenicillin 0.008 mg/ml
+0.5
+0.7
+1.0
-0.7
+0.0
stress
Furfuryl Alcohol 0.2 vol%
+0.1
+0.5
+1.5
-0.5
+0.1
RCH2 grown on a colony of ecoli
-0.5
+0.2
+1.9
+0.5
-0.0
stress
Nickel (II) chloride 0.9 mM
+0.5
-0.1
+1.7
+0.2
-0.0
RCH2 grown on a colony of Serratia
+1.0
-0.4
+0.2
+1.2
+0.3
stress
Lactate-nitrate; anaerobic; copper stress sample1
+0.1
+0.5
+1.8
-0.2
+0.2
anaerobic
Nitrite/ lactate media with Nitrite 20mM
+0.3
+0.2
+1.6
+0.2
+0.2
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